BLASTX nr result

ID: Panax21_contig00027729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027729
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...    40   5e-06
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...    40   6e-06

>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score = 40.0 bits (92), Expect(2) = 5e-06
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -3

Query: 100 IKKY*EQLNGANELVEDLEISIRPIQKELNELQ 2
           +K   + L  AN LV+DLE +IRP++KELNEL+
Sbjct: 189 LKNIFDNLRSANALVDDLESTIRPVEKELNELR 221



 Score = 35.0 bits (79), Expect(2) = 5e-06
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 144 QFFFKATLLHHVDDLLKSIENN 79
           +FFFKATLL  VDDLLK+I +N
Sbjct: 174 KFFFKATLLQQVDDLLKNIFDN 195


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score = 39.7 bits (91), Expect(2) = 6e-06
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = -3

Query: 100 IKKY*EQLNGANELVEDLEISIRPIQKELNEL 5
           +K   + L  AN LV+DLE +IRP++KELNEL
Sbjct: 189 LKNIFDNLRSANALVDDLESTIRPVEKELNEL 220



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 144 QFFFKATLLHHVDDLLKSIENN 79
           +FFFKATLL  VDDLLK+I +N
Sbjct: 174 KFFFKATLLQQVDDLLKNIFDN 195


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