BLASTX nr result

ID: Panax21_contig00027725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027725
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat...   311   1e-82
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]   308   9e-82
ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   261   7e-68
ref|NP_177580.1| pentatricopeptide repeat-containing protein [Ar...   238   7e-61
ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arab...   233   3e-59

>ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74400-like [Vitis vinifera]
          Length = 482

 Score =  311 bits (796), Expect = 1e-82
 Identities = 152/233 (65%), Positives = 180/233 (77%), Gaps = 8/233 (3%)
 Frame = +3

Query: 6   LFDSIKKKDVTTWTSMIVGYALHGQAEEALQLYAAMTRDNRNATSKKMKRGHESHLIVPN 185
           LFD  +KKDVTTWTSMIVG+ALHGQAEEALQL+  M   N+ A   K    HES L++PN
Sbjct: 228 LFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEHESSLVLPN 287

Query: 186 DVTFIGVLMACSHAGMVEEGKHHLKSMTEIYGLKPRLSHFGCIVDLLCRAGLLQEAYEFV 365
           DVTF+GVLMACSHAG+VEEGK H +SM E Y L+PR+SHFGC+VDLLCRAGLL EAYEF+
Sbjct: 288 DVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI 347

Query: 366 MAMPVQPNAVVWRTLLGACSVDG--------NVNLATEAHRHLLELEESLAGDDVVMSNV 521
           + MPV+PNAVVWRTLLGACS+ G        N+ + +EA R LLELE S  GD+V+MSN+
Sbjct: 348 LKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNL 407

Query: 522 YAAKEMWDKKVSIRHQIKQRRTPGCSSIEVESDISEFVTAAADHPFASEICDV 680
           YAAK MWDKK+ +R+QIKQRR PGCSSIEV  DI EFV A   HP   +I ++
Sbjct: 408 YAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEI 460


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  308 bits (788), Expect = 9e-82
 Identities = 151/233 (64%), Positives = 179/233 (76%), Gaps = 8/233 (3%)
 Frame = +3

Query: 6    LFDSIKKKDVTTWTSMIVGYALHGQAEEALQLYAAMTRDNRNATSKKMKRGHESHLIVPN 185
            LFD  +KKDVTTWTSMIVG+ALHGQAEEALQL+  M   N+ A   K     ES L++PN
Sbjct: 806  LFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPN 865

Query: 186  DVTFIGVLMACSHAGMVEEGKHHLKSMTEIYGLKPRLSHFGCIVDLLCRAGLLQEAYEFV 365
            DVTF+GVLMACSHAG+VEEGK H +SM E Y L+PR+SHFGC+VDLLCRAGLL EAYEF+
Sbjct: 866  DVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFI 925

Query: 366  MAMPVQPNAVVWRTLLGACSVDG--------NVNLATEAHRHLLELEESLAGDDVVMSNV 521
            + MPV+PNAVVWRTLLGACS+ G        N+ + +EA R LLELE S  GD+V+MSN+
Sbjct: 926  LKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNL 985

Query: 522  YAAKEMWDKKVSIRHQIKQRRTPGCSSIEVESDISEFVTAAADHPFASEICDV 680
            YAAK MWDKK+ +R+QIKQRR PGCSSIEV  DI EFV A   HP   +I ++
Sbjct: 986  YAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDIKEFVAADDQHPCMPQIYEI 1038


>ref|XP_003522318.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74400-like [Glycine max]
          Length = 333

 Score =  261 bits (668), Expect = 7e-68
 Identities = 128/222 (57%), Positives = 164/222 (73%), Gaps = 1/222 (0%)
 Frame = +3

Query: 6   LFDSIKKKDVTTWTSMIVGYALHGQAEEALQLYAAMTRDNRNATSKKMKRGHESHLIVPN 185
           +FD +  KDVTTW SMIVG+A+HGQA EALQL++ M             R  +  ++ PN
Sbjct: 124 VFDGMXNKDVTTWISMIVGHAVHGQAREALQLFSEM-------------RDKDDCVLTPN 170

Query: 186 DVTFIGVLMACSHAGMVEEGKHHLKSMTEIYGLKPRLSHFGCIVDLLCRAG-LLQEAYEF 362
           DVTFIGVLMACSHAGMVEEGK H +SM+E+YG++PR +HFGC+VDLLCR G  L+++Y+F
Sbjct: 171 DVTFIGVLMACSHAGMVEEGKLHFRSMSEVYGIEPREAHFGCMVDLLCRVGGHLRDSYDF 230

Query: 363 VMAMPVQPNAVVWRTLLGACSVDGNVNLATEAHRHLLELEESLAGDDVVMSNVYAAKEMW 542
           +M MPV PNAVVWRTLLGACSV G + LA E  + LL+L+     D V MSN+YA K MW
Sbjct: 231 IMEMPVPPNAVVWRTLLGACSVRGELELAAEVRQKLLKLDLGYVVDSVAMSNIYANKGMW 290

Query: 543 DKKVSIRHQIKQRRTPGCSSIEVESDISEFVTAAADHPFASE 668
           +KK+ +++QIKQ R PGCSSIEV S +SEFV +  +HP  ++
Sbjct: 291 NKKIVVKNQIKQSRAPGCSSIEVGSGVSEFVVSDDNHPLMTD 332


>ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g74400 gi|12324820|gb|AAG52382.1|AC011765_34
           hypothetical protein; 20273-21661 [Arabidopsis thaliana]
           gi|332197466|gb|AEE35587.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 462

 Score =  238 bits (608), Expect = 7e-61
 Identities = 119/213 (55%), Positives = 155/213 (72%), Gaps = 2/213 (0%)
 Frame = +3

Query: 6   LFDSIKKKDVTTWTSMIVGYALHGQAEEALQLYAAMTRDNRNATSKKMKRGHESH--LIV 179
           LFD   +KDVTT+TSMI GYAL+GQA+E+L+L+            KKMK   +S   +I 
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELF------------KKMKTIDQSQDTVIT 273

Query: 180 PNDVTFIGVLMACSHAGMVEEGKHHLKSMTEIYGLKPRLSHFGCIVDLLCRAGLLQEAYE 359
           PNDVTFIGVLMACSH+G+VEEGK H KSM   Y LKPR +HFGC+VDL CR+G L++A+E
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHE 333

Query: 360 FVMAMPVQPNAVVWRTLLGACSVDGNVNLATEAHRHLLELEESLAGDDVVMSNVYAAKEM 539
           F+  MP++PN V+WRTLLGACS+ GNV L  E  R + EL+    GD V +SN+YA+K M
Sbjct: 334 FINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGM 393

Query: 540 WDKKVSIRHQIKQRRTPGCSSIEVESDISEFVT 638
           WD+K  +R ++++RR PG S IE+ S I+EFV+
Sbjct: 394 WDEKSKMRDRVRKRRMPGKSWIELGSIINEFVS 426


>ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
           lyrata] gi|297333380|gb|EFH63798.1| hypothetical protein
           ARALYDRAFT_339633 [Arabidopsis lyrata subsp. lyrata]
          Length = 665

 Score =  233 bits (594), Expect = 3e-59
 Identities = 114/216 (52%), Positives = 154/216 (71%)
 Frame = +3

Query: 6   LFDSIKKKDVTTWTSMIVGYALHGQAEEALQLYAAMTRDNRNATSKKMKRGHESHLIVPN 185
           LFD   +KDVTT+T MI GYAL+G+A+E+L+L+  M          KM    +  +I PN
Sbjct: 226 LFDETMRKDVTTYTCMIFGYALNGEAQESLELFKKM----------KMIDQSQDTVITPN 275

Query: 186 DVTFIGVLMACSHAGMVEEGKHHLKSMTEIYGLKPRLSHFGCIVDLLCRAGLLQEAYEFV 365
           DVTFIGVLMACSH+G+VEEGK + KSM   Y LKPR +HFGC+VDL CR+G L++A+EF+
Sbjct: 276 DVTFIGVLMACSHSGLVEEGKQYFKSMIVDYNLKPRDAHFGCMVDLFCRSGHLKDAHEFI 335

Query: 366 MAMPVQPNAVVWRTLLGACSVDGNVNLATEAHRHLLELEESLAGDDVVMSNVYAAKEMWD 545
             MP++PNAV+WRTLLGAC + GNV L  E  + + +LE    GD V +SN+YA+K MWD
Sbjct: 336 KQMPIKPNAVIWRTLLGACILHGNVELGEEVQKRIFKLERDHVGDYVALSNIYASKGMWD 395

Query: 546 KKVSIRHQIKQRRTPGCSSIEVESDISEFVTAAADH 653
           +K  +R ++++RR PG S IE+ S I+EFV+   D+
Sbjct: 396 EKWKMRDRVRKRRVPGKSWIELRSIITEFVSGHDDN 431


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