BLASTX nr result

ID: Panax21_contig00027703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027703
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 com...   140   8e-32
ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
gb|ABK96051.1| unknown [Populus trichocarpa]                          138   5e-31
ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 com...   137   1e-30
ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assemb...   137   1e-30

>ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Vitis vinifera] gi|296081322|emb|CBI17704.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  140 bits (354), Expect = 8e-32
 Identities = 76/121 (62%), Positives = 85/121 (70%)
 Frame = -2

Query: 363 VTRPKIIDHLMKKFPQDLVFCRAPGDNVLTSGVLERQVEKIDPLLAWVXXXXXXXXXXXX 184
           +TR KII++LMKKF QDLVFCRAPGD+ LT GVLERQVEKIDPLL               
Sbjct: 167 LTRMKIIEYLMKKFHQDLVFCRAPGDSDLTIGVLERQVEKIDPLLQ-------------- 212

Query: 183 XXXXXXXXDPLLAWVESEFGFKPVVYSSFFGGKQEDGLLKAIEGLLKIINDCELAAIDAL 4
                        WVES+FGFKP+VYSSFFGGKQEDGL+ AIE LLK  +DCELAAIDA+
Sbjct: 213 -------------WVESQFGFKPIVYSSFFGGKQEDGLVNAIENLLKKTDDCELAAIDAI 259

Query: 3   A 1
           A
Sbjct: 260 A 260


>ref|XP_002300073.1| predicted protein [Populus trichocarpa] gi|222847331|gb|EEE84878.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/121 (59%), Positives = 83/121 (68%)
 Frame = -2

Query: 363 VTRPKIIDHLMKKFPQDLVFCRAPGDNVLTSGVLERQVEKIDPLLAWVXXXXXXXXXXXX 184
           +TRPKII+HLMKKF QDLVFCRAP DNVLTSGV ERQVEK DP                 
Sbjct: 110 LTRPKIIEHLMKKFSQDLVFCRAPEDNVLTSGVYERQVEKFDP----------------- 152

Query: 183 XXXXXXXXDPLLAWVESEFGFKPVVYSSFFGGKQEDGLLKAIEGLLKIINDCELAAIDAL 4
                     L+ W++SEFGFKPVV+S  FGGKQE+GL+KAIE LLK  +DC+LA IDA+
Sbjct: 153 ----------LIGWIKSEFGFKPVVHSCLFGGKQEEGLVKAIENLLKQTDDCQLAVIDAI 202

Query: 3   A 1
           A
Sbjct: 203 A 203


>gb|ABK96051.1| unknown [Populus trichocarpa]
          Length = 330

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/121 (59%), Positives = 83/121 (68%)
 Frame = -2

Query: 363 VTRPKIIDHLMKKFPQDLVFCRAPGDNVLTSGVLERQVEKIDPLLAWVXXXXXXXXXXXX 184
           +TRPKII+HLMKKF QDLVFCRAP DNVLTSGV ERQVEK DP                 
Sbjct: 170 LTRPKIIEHLMKKFSQDLVFCRAPEDNVLTSGVYERQVEKFDP----------------- 212

Query: 183 XXXXXXXXDPLLAWVESEFGFKPVVYSSFFGGKQEDGLLKAIEGLLKIINDCELAAIDAL 4
                     L+ W++SEFGFKPVV+S  FGGKQE+GL+KAIE LLK  +DC+LA IDA+
Sbjct: 213 ----------LIGWIKSEFGFKPVVHSCLFGGKQEEGLVKAIENLLKQTDDCQLAVIDAI 262

Query: 3   A 1
           A
Sbjct: 263 A 263


>ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
           gi|449492905|ref|XP_004159136.1| PREDICTED: ATP synthase
           mitochondrial F1 complex assembly factor 2-like [Cucumis
           sativus]
          Length = 330

 Score =  137 bits (344), Expect = 1e-30
 Identities = 73/121 (60%), Positives = 82/121 (67%)
 Frame = -2

Query: 363 VTRPKIIDHLMKKFPQDLVFCRAPGDNVLTSGVLERQVEKIDPLLAWVXXXXXXXXXXXX 184
           +TR  II+HL+KKF  DLVFCRAP +NVLTSGV ERQVEKIDPLL               
Sbjct: 169 LTRHTIIEHLIKKFNSDLVFCRAPEENVLTSGVYERQVEKIDPLLD-------------- 214

Query: 183 XXXXXXXXDPLLAWVESEFGFKPVVYSSFFGGKQEDGLLKAIEGLLKIINDCELAAIDAL 4
                        WV SEFGFKP+VYSSFFGG QEDGL+KA+E LLK  NDCELA+IDA+
Sbjct: 215 -------------WVHSEFGFKPIVYSSFFGGNQEDGLIKAVEDLLKKTNDCELASIDAI 261

Query: 3   A 1
           A
Sbjct: 262 A 262


>ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
           gi|223533694|gb|EEF35429.1| ATP synthase mitochondrial
           F1 complex assembly factor 2, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 334

 Score =  137 bits (344), Expect = 1e-30
 Identities = 76/121 (62%), Positives = 85/121 (70%)
 Frame = -2

Query: 363 VTRPKIIDHLMKKFPQDLVFCRAPGDNVLTSGVLERQVEKIDPLLAWVXXXXXXXXXXXX 184
           +TR KII++LMKKF QDLVFCRAP DN LTSGV ERQVEKIDPLL               
Sbjct: 174 LTRLKIIENLMKKFNQDLVFCRAPEDNDLTSGVYERQVEKIDPLLD-------------- 219

Query: 183 XXXXXXXXDPLLAWVESEFGFKPVVYSSFFGGKQEDGLLKAIEGLLKIINDCELAAIDAL 4
                        WV+SEFGFKPVVYSSFFGGKQE+GL+KAIE LLK  ++CELAAIDA+
Sbjct: 220 -------------WVKSEFGFKPVVYSSFFGGKQEEGLVKAIEDLLKKTDNCELAAIDAI 266

Query: 3   A 1
           A
Sbjct: 267 A 267


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