BLASTX nr result

ID: Panax21_contig00027701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027701
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   189   2e-46
emb|CBI16322.3| unnamed protein product [Vitis vinifera]              175   3e-42
gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]        167   1e-39
ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersic...   167   1e-39
ref|XP_002529941.1| Auxin response factor, putative [Ricinus com...   163   2e-38

>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  189 bits (481), Expect = 2e-46
 Identities = 100/160 (62%), Positives = 118/160 (73%), Gaps = 6/160 (3%)
 Frame = +1

Query: 1    FGQPILTEQQISLDCSKDAVLQVPTQKSLLGENFEKPERC------VLNRLGLPENLSTT 162
            FGQPILTEQQ+S  CS DAV QV T KS    + +K ++        L + G PENLS  
Sbjct: 523  FGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQKGKPENLSNV 582

Query: 163  GFLCNQGFRTAELGLETGHCKVFLDSEDVGWTLDLSVLGSYAELHRRLANMLGTERSEMM 342
            GF  +QGF+T E+GL+TGHCKVF++SEDVG +LDLSVLGSY EL+ RLANM G ERSE  
Sbjct: 583  GFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERSETF 642

Query: 343  TRVLYRDVTGAVKQTGDEPFSEFMKTAKRLSIQMDSGINS 462
            + VLYRD TGAVK TGDEPFS+F K AKRL+I MDSG N+
Sbjct: 643  SHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNN 682


>emb|CBI16322.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  175 bits (444), Expect = 3e-42
 Identities = 94/154 (61%), Positives = 108/154 (70%)
 Frame = +1

Query: 1   FGQPILTEQQISLDCSKDAVLQVPTQKSLLGENFEKPERCVLNRLGLPENLSTTGFLCNQ 180
           FGQPILTEQQ+S  CS DAV QV T K                     +NLS  GF  +Q
Sbjct: 385 FGQPILTEQQMSRTCSSDAVSQVLTGK---------------------KNLSNVGFSWHQ 423

Query: 181 GFRTAELGLETGHCKVFLDSEDVGWTLDLSVLGSYAELHRRLANMLGTERSEMMTRVLYR 360
           GF+T E+GL+TGHCKVF++SEDVG +LDLSVLGSY EL+ RLANM G ERSE  + VLYR
Sbjct: 424 GFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERSETFSHVLYR 483

Query: 361 DVTGAVKQTGDEPFSEFMKTAKRLSIQMDSGINS 462
           D TGAVK TGDEPFS+F K AKRL+I MDSG N+
Sbjct: 484 DATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNN 517


>gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  167 bits (422), Expect = 1e-39
 Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = +1

Query: 1   FGQPILTEQQISLDCSKDAVLQVPTQKSLLGENFEKPERCVLNRLG-LPENLSTTGFLCN 177
           FGQPILTEQQIS  CS  A   V T K L G      E+    + G + +NLS+  F  N
Sbjct: 517 FGQPILTEQQISNGCSVSAPQVVQTGKDL-GRIQPINEKHPSEQKGSIQDNLSSATFFWN 575

Query: 178 QGFRTAELG-LETGHCKVFLDSEDVGWTLDLSVLGSYAELHRRLANMLGTERSEMMTRVL 354
           +G+  AELG L TGHCKVFL+SEDVG TLDLSV+GSY EL++RLANM G ER +M+TRVL
Sbjct: 576 RGYHAAELGVLNTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTRVL 635

Query: 355 YRDVTGAVKQTGDEPFSEFMKTAKRLSIQMDSGIN 459
           Y D TGAVK TGDEPFS+F+K+AKRL+I M+S  N
Sbjct: 636 YHDATGAVKHTGDEPFSDFVKSAKRLTILMNSSSN 670


>ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
           gi|300676100|gb|ADK26472.1| auxin response factor 10
           [Solanum lycopersicum]
          Length = 699

 Score =  167 bits (422), Expect = 1e-39
 Identities = 94/155 (60%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
 Frame = +1

Query: 1   FGQPILTEQQISLDCSKDAVLQVPTQKSLLGENFEKPERCVLNRLG-LPENLSTTGFLCN 177
           FGQPILTEQQIS  CS  A   V T K L G      E+    + G + +NLS+  F  N
Sbjct: 517 FGQPILTEQQISNGCSVSAPQVVQTGKDL-GRIQPINEKHPSEQKGSIQDNLSSATFFWN 575

Query: 178 QGFRTAELG-LETGHCKVFLDSEDVGWTLDLSVLGSYAELHRRLANMLGTERSEMMTRVL 354
           +G+  AELG L TGHCKVFL+SEDVG TLDLSV+GSY EL++RLANM G ER +M+TRVL
Sbjct: 576 RGYHAAELGVLNTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTRVL 635

Query: 355 YRDVTGAVKQTGDEPFSEFMKTAKRLSIQMDSGIN 459
           Y D TGAVK TGDEPFS+F+K+AKRL+I M+S  N
Sbjct: 636 YHDATGAVKHTGDEPFSDFVKSAKRLTILMNSSSN 670


>ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
           gi|223530571|gb|EEF32449.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 709

 Score =  163 bits (412), Expect = 2e-38
 Identities = 94/156 (60%), Positives = 110/156 (70%), Gaps = 7/156 (4%)
 Frame = +1

Query: 1   FGQPILTEQQISLDCSKDAVLQVPTQKSLLGENFEKPERCVLNRLGL-------PENLST 159
           FGQPILTEQQIS  CS DAV QV ++K    E+ EK +  + + LG        PE  ++
Sbjct: 522 FGQPILTEQQISRSCSTDAVSQVLSKKLSSDESPEKAK--IHDVLGSTPEKQTSPEKSAS 579

Query: 160 TGFLCNQGFRTAELGLETGHCKVFLDSEDVGWTLDLSVLGSYAELHRRLANMLGTERSEM 339
           TG L  Q   T E GL+ GHCKVFL+SEDVG TLDLSVLGSY EL+ RLANM G ERSEM
Sbjct: 580 TG-LSWQSLHTTETGLDAGHCKVFLESEDVGRTLDLSVLGSYEELYSRLANMFGIERSEM 638

Query: 340 MTRVLYRDVTGAVKQTGDEPFSEFMKTAKRLSIQMD 447
           +  VLYRD  GA++QTGDEPFS F KTAKRL+I M+
Sbjct: 639 LHHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTILMN 674


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