BLASTX nr result

ID: Panax21_contig00027688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027688
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...   452   e-125
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]    447   e-124
gb|ADA70357.1| proliferation cell nuclear antigen [Persea americ...   436   e-120
gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nic...   426   e-117
sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear...   426   e-117

>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
            Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score =  452 bits (1163), Expect(2) = e-125
 Identities = 241/336 (71%), Positives = 263/336 (78%), Gaps = 2/336 (0%)
 Frame = +2

Query: 68   QGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 247
            QG LLKKV+ESIKDLVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHYRCDRN+S
Sbjct: 8    QGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHYRCDRNIS 67

Query: 248  MGINLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 427
            MG+NLGNM+KML+CAGNDDI+T+KADD GD +TFMFESPTQDKI+DFEMKLMDIDSEHLG
Sbjct: 68   MGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMDIDSEHLG 127

Query: 428  IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 607
            IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS
Sbjct: 128  IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 187

Query: 608  VDKPEEATIIEMQEPISLTFALRYMNSFTKATPLANQXXXXXXXXXXXXXXYKIAEMGYI 787
            VDKPE+ATIIEMQE +SLTFALRYMNSFTKATPLANQ              YKIAEMGYI
Sbjct: 188  VDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYKIAEMGYI 247

Query: 788  RYYLXXXXXXXXXXXXXXXXXXTKSATETNTKRAANPEPRVEAVSEMEADPVIKSE--PE 961
            RYYL                    +A  T+       E   +  S+  A   IKSE   +
Sbjct: 248  RYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKNEGNNKVDSKKRA---IKSEFVDD 304

Query: 962  EESNTAAKTITKMETKPEKQTNGEDDVIEVMDTKPK 1069
             E+ T A+   K +TK E    GEDD +EVMDTKPK
Sbjct: 305  SEAATDAQPQAKAKTKTEA---GEDDDVEVMDTKPK 337



 Score = 24.3 bits (51), Expect(2) = e-125
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1069 ETNGEAEVMDVE 1104
            E+NGE EVMD+E
Sbjct: 354  ESNGEVEVMDIE 365


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score =  447 bits (1150), Expect(2) = e-124
 Identities = 241/338 (71%), Positives = 263/338 (77%), Gaps = 4/338 (1%)
 Frame = +2

Query: 68   QGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 247
            QG LLKKV+ESIKDLVNDANFDCSA+GFSLQAMDSSHVALVA+LLRSEGFEHYRCDRN+S
Sbjct: 8    QGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHYRCDRNIS 67

Query: 248  MGINLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 427
            MG+NLGNM+KML+CAGNDDI+T+KADD GD +TFMFESPTQDKI+DFEMKLMDIDSEHLG
Sbjct: 68   MGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMDIDSEHLG 127

Query: 428  IPES--EYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQN 601
            IPES  EYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQN
Sbjct: 128  IPESEYEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQN 187

Query: 602  TSVDKPEEATIIEMQEPISLTFALRYMNSFTKATPLANQXXXXXXXXXXXXXXYKIAEMG 781
            TSVDKPE+ATIIEMQE +SLTFALRYMNSFTKATPLANQ              YKIAEMG
Sbjct: 188  TSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYKIAEMG 247

Query: 782  YIRYYLXXXXXXXXXXXXXXXXXXTKSATETNTKRAANPEPRVEAVSEMEADPVIKSE-- 955
            YIRYYL                    +A  T+       E   +  S+  A   IKSE  
Sbjct: 248  YIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTKKNEGNNKVDSKKRA---IKSEFV 304

Query: 956  PEEESNTAAKTITKMETKPEKQTNGEDDVIEVMDTKPK 1069
             + E+ T A+   K +TK E    GEDD +EVMDTKPK
Sbjct: 305  DDSEAATDAQPQAKAKTKTEA---GEDDDVEVMDTKPK 339



 Score = 24.3 bits (51), Expect(2) = e-124
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1069 ETNGEAEVMDVE 1104
            E+NGE EVMD+E
Sbjct: 356  ESNGEVEVMDIE 367


>gb|ADA70357.1| proliferation cell nuclear antigen [Persea americana]
          Length = 290

 Score =  436 bits (1120), Expect = e-120
 Identities = 227/299 (75%), Positives = 241/299 (80%)
 Frame = +2

Query: 68  QGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 247
           QGSLLKKV+ES+KDLV DANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS
Sbjct: 8   QGSLLKKVLESVKDLVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 67

Query: 248 MGINLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 427
           MG+NL NMSKMLKCAGNDDIITIKADDG DTVTFMFESPTQDKIADFEMKLMDIDSEHLG
Sbjct: 68  MGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 127

Query: 428 IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 607
           IPE+EY AIVRMPSAEFARICKDLS+IGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS
Sbjct: 128 IPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 187

Query: 608 VDKPEEATIIEMQEPISLTFALRYMNSFTKATPLANQXXXXXXXXXXXXXXYKIAEMGYI 787
           VDKPEE+TIIEM EP+SLTFALRYMNSFTKATPLAN               YKIAEMGYI
Sbjct: 188 VDKPEESTIIEMNEPVSLTFALRYMNSFTKATPLANSVTISLSSELPVVVEYKIAEMGYI 247

Query: 788 RYYLXXXXXXXXXXXXXXXXXXTKSATETNTKRAANPEPRVEAVSEMEADPVIKSEPEE 964
           R+YL                       E   +  A P P  +A  E +A+   KSEP++
Sbjct: 248 RFYLAPKI----------------EDDEEGMQAEAQPPPEKKAKKEPKAEAEAKSEPDD 290


>gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nicotiana benthamiana]
          Length = 264

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/244 (86%), Positives = 226/244 (92%)
 Frame = +2

Query: 68  QGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 247
           QGSLLKKV+ESIK+LVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRN+S
Sbjct: 8   QGSLLKKVLESIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNIS 67

Query: 248 MGINLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 427
           MG+NLGNM+KMLKCAGNDDIIT+KADDG DTVTFMFESPTQDKIADFEMKLMDIDSEHLG
Sbjct: 68  MGMNLGNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 127

Query: 428 IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 607
           IPE+EY AIVRMPSAEFARICKDLS+IGDTVVISVTKEGVKFSTRGDIGTAN+VCRQNT+
Sbjct: 128 IPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANVVCRQNTT 187

Query: 608 VDKPEEATIIEMQEPISLTFALRYMNSFTKATPLANQXXXXXXXXXXXXXXYKIAEMGYI 787
           VDKPEEAT+IEM EP+SLTFALRY+NSFTKATPL+N               YKIAEMGYI
Sbjct: 188 VDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYKIAEMGYI 247

Query: 788 RYYL 799
           R+YL
Sbjct: 248 RFYL 251


>sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear antigen; Short=PCNA;
           AltName: Full=Cyclin
          Length = 264

 Score =  426 bits (1094), Expect = e-117
 Identities = 212/244 (86%), Positives = 226/244 (92%)
 Frame = +2

Query: 68  QGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLS 247
           QGSLLKKVM+SIKDLVNDANFDCSATGFSLQAMDSSHVALVA+LLRSEGFEHYRCDRN+S
Sbjct: 8   QGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHYRCDRNIS 67

Query: 248 MGINLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 427
           MG+NLGNM+KMLKCAGNDDIITIKADDG DTVTFMFESPTQDKIADFEMKLMDIDSEHLG
Sbjct: 68  MGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLG 127

Query: 428 IPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTS 607
           IPE+EY AIVRMPSAEFARICKDLS+IGDTVVISVTKEGVKFSTRGDIGTANIVCRQNT+
Sbjct: 128 IPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANIVCRQNTT 187

Query: 608 VDKPEEATIIEMQEPISLTFALRYMNSFTKATPLANQXXXXXXXXXXXXXXYKIAEMGYI 787
           VDKPEEAT+IEM EP+SLTFALRYMNSFTKA+PL++               YKIAEMGYI
Sbjct: 188 VDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYKIAEMGYI 247

Query: 788 RYYL 799
           R+YL
Sbjct: 248 RFYL 251


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