BLASTX nr result
ID: Panax21_contig00027672
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00027672
(1042 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici... 242 1e-61
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 231 2e-58
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 231 2e-58
gb|AFK47668.1| unknown [Medicago truncatula] 227 4e-57
ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [... 227 4e-57
>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550379|gb|EEF51866.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 495
Score = 242 bits (618), Expect = 1e-61
Identities = 111/164 (67%), Positives = 130/164 (79%), Gaps = 10/164 (6%)
Frame = +2
Query: 539 DEKHRRYYYPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKEESSDML 718
+ +H +Y YP+RP+AEDCSYYMKTGTCKFGSNCKFNHP+ R+ +KE K++EE++D
Sbjct: 133 NRRHNQYQYPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRP 192
Query: 719 GQTECKYYLTSGGCKYGKACRYKHSR-------GKTVVAPILEFNFLGLPIRPGEKECPY 877
GQTECKYYL +GGCKYGKACRY HSR KT V P L+ NFLGLPIRPGE+ECPY
Sbjct: 193 GQTECKYYLRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLPIRPGERECPY 252
Query: 878 YMRNGSCKYGSNCRFNHPDP-TVGGGDPL--SGYGDSSAEQALQ 1000
YMRNGSCKYG+NCRFNHPDP TVGG DPL S G +S + +LQ
Sbjct: 253 YMRNGSCKYGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQ 296
Score = 82.0 bits (201), Expect = 2e-13
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Frame = +2
Query: 644 NHPLGRRNLTTKETFKQKEESSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPIL 823
++P N+ + Q EE + GQ EC Y++ +G CK+ C+Y H + +P
Sbjct: 356 SNPATDTNVYAHQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPC 415
Query: 824 EFNFLGLPIRPGEKECPYYMRNGSCKYGSNCRFNHP----DPTVGGGDPL-SGYGDSSAE 988
+ GLP+RPG+ C YY R G CK+G C+F+HP T G D + + DS +
Sbjct: 416 VLSDKGLPLRPGQNICSYYSRYGICKFGPACKFDHPIQPVSSTTGSADDVRMPFSDSGTK 475
Query: 989 Q 991
+
Sbjct: 476 E 476
Score = 69.7 bits (169), Expect = 1e-09
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 563 YPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKEESSDML-GQTECKY 739
+P RP +CSY+MKTG CKF SNCK++HP + +++ ++ + GQ C Y
Sbjct: 376 FPERPGQPECSYFMKTGDCKFKSNCKYHHP--KNHISKSPPCVLSDKGLPLRPGQNICSY 433
Query: 740 YLTSGGCKYGKACRYKH 790
Y G CK+G AC++ H
Sbjct: 434 YSRYGICKFGPACKFDH 450
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 231 bits (590), Expect = 2e-58
Identities = 102/158 (64%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
Frame = +2
Query: 521 DSAGLKDEKHRRYYYPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKE 700
D + KD+K R+ YP+RPDA DCS+Y++TGTCKFGSNCKFNHP+ R+N KE K+KE
Sbjct: 112 DESAAKDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKE 171
Query: 701 --ESSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECP 874
E + GQTECKYYL +GGCK+GKACRY H++ K P+LE NFLGLPIR GEKECP
Sbjct: 172 KEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECP 231
Query: 875 YYMRNGSCKYGSNCRFNHPDPTVGGG-DPLSGYGDSSA 985
YYMR GSCKYG+NCRFNHPDPT GG + SGYG+ +
Sbjct: 232 YYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGS 269
Score = 77.4 bits (189), Expect = 5e-12
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 698 EESSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECPY 877
E+ + GQ EC Y+L +G CK+ AC+Y H + + +P + GLP+RP + C +
Sbjct: 357 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 416
Query: 878 YMRNGSCKYGSNCRFNHP 931
Y R G CK+G C+F+HP
Sbjct: 417 YNRYGICKFGPACKFDHP 434
Score = 62.4 bits (150), Expect = 2e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 563 YPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKEESSDMLGQTECKYY 742
+P RP +CSY++KTG CKF + CK++HP R + T K Q C +Y
Sbjct: 359 FPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPL-RPDQNICTHY 417
Query: 743 LTSGGCKYGKACRYKH--SRGKTVVAPILE 826
G CK+G AC++ H + G + AP E
Sbjct: 418 NRYGICKFGPACKFDHPVNYGNSASAPSAE 447
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 231 bits (590), Expect = 2e-58
Identities = 102/158 (64%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
Frame = +2
Query: 521 DSAGLKDEKHRRYYYPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKE 700
D + KD+K R+ YP+RPDA DCS+Y++TGTCKFGSNCKFNHP+ R+N KE K+KE
Sbjct: 112 DESAAKDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKE 171
Query: 701 --ESSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECP 874
E + GQTECKYYL +GGCK+GKACRY H++ K P+LE NFLGLPIR GEKECP
Sbjct: 172 KEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECP 231
Query: 875 YYMRNGSCKYGSNCRFNHPDPTVGGG-DPLSGYGDSSA 985
YYMR GSCKYG+NCRFNHPDPT GG + SGYG+ +
Sbjct: 232 YYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGS 269
Score = 77.4 bits (189), Expect = 5e-12
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 698 EESSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECPY 877
E+ + GQ EC Y+L +G CK+ AC+Y H + + +P + GLP+RP + C +
Sbjct: 360 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 419
Query: 878 YMRNGSCKYGSNCRFNHP 931
Y R G CK+G C+F+HP
Sbjct: 420 YNRYGICKFGPACKFDHP 437
Score = 62.4 bits (150), Expect = 2e-07
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 563 YPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLTTKETFKQKEESSDMLGQTECKYY 742
+P RP +CSY++KTG CKF + CK++HP R + T K Q C +Y
Sbjct: 362 FPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPL-RPDQNICTHY 420
Query: 743 LTSGGCKYGKACRYKH--SRGKTVVAPILE 826
G CK+G AC++ H + G + AP E
Sbjct: 421 NRYGICKFGPACKFDHPVNYGNSASAPSAE 450
>gb|AFK47668.1| unknown [Medicago truncatula]
Length = 455
Score = 227 bits (578), Expect = 4e-57
Identities = 135/335 (40%), Positives = 178/335 (53%), Gaps = 27/335 (8%)
Frame = +2
Query: 62 LSDELRDRASIEFIDEAPEKSHDTKDGGA---------NDEEINRKEYDEAKSQRDGEIC 214
L ++L + E + E +K + DGG D+ +N + + +R EI
Sbjct: 55 LHEKLDLKVEDEGVVETDDKVSNFNDGGVVSDERGSETEDKVLNFDDDERVGDERGAEIE 114
Query: 215 PVLE-----ENEAENKDLKGSSIDKHES-KWREFENEEGNDNIKVKEEKEQGTIDYYXXX 376
+ E + + LKG +D+ ES K E EG + + V + + + +
Sbjct: 115 DKVSNFDDGERVGDEESLKGEKVDEEESVKGENEEFVEGEERVDVDGDSKGWDTNSWNE- 173
Query: 377 XXXXXXXXXXXRKFEVKEEQGIFGNYED----ETXXXXXXXXXXXXXXXXXGDSAGLKDE 544
V EE G + +D GD G DE
Sbjct: 174 --------------NVNEELGGGRDADDWGYGVGNGGGAGYGYGAGYGDGYGDGYGYGDE 219
Query: 545 KHRR-----YYYPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLT--TKETFKQKEE 703
K + + +PLRP+AEDCS+YMKTG+CKFG NCKFNHP+ R+N +E +++EE
Sbjct: 220 KEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREE 279
Query: 704 SSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECPYYM 883
+ GQTECKYY SGGCK+GKAC+Y HSRG T API E NFLGLPIR GE+ECPYYM
Sbjct: 280 PEENAGQTECKYYQRSGGCKFGKACKYNHSRGFT--APISELNFLGLPIRLGERECPYYM 337
Query: 884 RNGSCKYGSNCRFNHPDP-TVGGGDPLSGYGDSSA 985
R GSCK+GSNCRFNHPDP TVGG DP SGYG+ +
Sbjct: 338 RTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGS 372
>ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509959|gb|AES91101.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 573
Score = 227 bits (578), Expect = 4e-57
Identities = 135/335 (40%), Positives = 178/335 (53%), Gaps = 27/335 (8%)
Frame = +2
Query: 62 LSDELRDRASIEFIDEAPEKSHDTKDGGA---------NDEEINRKEYDEAKSQRDGEIC 214
L ++L + E + E +K + DGG D+ +N + + +R EI
Sbjct: 55 LHEKLDLKVEDEGVVETDDKVSNFNDGGVVSDERGSETEDKVLNFDDDERVGDERGAEIE 114
Query: 215 PVLE-----ENEAENKDLKGSSIDKHES-KWREFENEEGNDNIKVKEEKEQGTIDYYXXX 376
+ E + + LKG +D+ ES K E EG + + V + + + +
Sbjct: 115 DKVSNFDDGERVGDEESLKGEKVDEEESVKGENEEFVEGEERVDVDGDSKGWDTNSWNE- 173
Query: 377 XXXXXXXXXXXRKFEVKEEQGIFGNYED----ETXXXXXXXXXXXXXXXXXGDSAGLKDE 544
V EE G + +D GD G DE
Sbjct: 174 --------------NVNEELGGGRDADDWGYGVGNGGGAGYGYGAGYGDGYGDGYGYGDE 219
Query: 545 KHRR-----YYYPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGRRNLT--TKETFKQKEE 703
K + + +PLRP+AEDCS+YMKTG+CKFG NCKFNHP+ R+N +E +++EE
Sbjct: 220 KEEKSSDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREE 279
Query: 704 SSDMLGQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECPYYM 883
+ GQTECKYY SGGCK+GKAC+Y HSRG T API E NFLGLPIR GE+ECPYYM
Sbjct: 280 PEENAGQTECKYYQRSGGCKFGKACKYNHSRGFT--APISELNFLGLPIRLGERECPYYM 337
Query: 884 RNGSCKYGSNCRFNHPDP-TVGGGDPLSGYGDSSA 985
R GSCK+GSNCRFNHPDP TVGG DP SGYG+ +
Sbjct: 338 RTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGS 372
Score = 73.2 bits (178), Expect = 1e-10
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +2
Query: 719 GQTECKYYLTSGGCKYGKACRYKHSRGKTVVAPILEFNFLGLPIRPGEKECPYYMRNGSC 898
G+ EC +++ +G CK+ C++ H + + P + GLP+RP + C +Y R G C
Sbjct: 463 GEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGIC 522
Query: 899 KYGSNCRFNHPD 934
K+G CRF+HP+
Sbjct: 523 KFGPACRFDHPE 534
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = +2
Query: 563 YPLRPDAEDCSYYMKTGTCKFGSNCKFNHPLGR------RNLTTKETFKQKEESSDMLGQ 724
+P RP +CS+++KTG CKF SNCKF+HP R NL+ K + + Q
Sbjct: 458 FPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPD-------Q 510
Query: 725 TECKYYLTSGGCKYGKACRYKH 790
+ C +Y G CK+G ACR+ H
Sbjct: 511 SVCSHYSRYGICKFGPACRFDH 532