BLASTX nr result

ID: Panax21_contig00027669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027669
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27055.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259...   128   4e-28
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra...   124   6e-27
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra...   124   6e-27
ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786...   115   3e-24

>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/74 (79%), Positives = 64/74 (86%)
 Frame = +3

Query: 171 MAEKQLIVAVEGTAAMGPYWHTIVTDYLEKIIRCFCGNELTGQKPSVPNVEFSLVMFNAH 350
           MAEKQL+VAVEGTAAMGPYW  +V+DYL+KIIR FCGNEL GQKPS  N E SLVMFNAH
Sbjct: 1   MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 351 GSYSPCLVQKSGWT 392
           GSY  CLVQ+SGWT
Sbjct: 61  GSYCSCLVQRSGWT 74


>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
          Length = 827

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/74 (79%), Positives = 64/74 (86%)
 Frame = +3

Query: 171 MAEKQLIVAVEGTAAMGPYWHTIVTDYLEKIIRCFCGNELTGQKPSVPNVEFSLVMFNAH 350
           MAEKQL+VAVEGTAAMGPYW  +V+DYL+KIIR FCGNEL GQKPS  N E SLVMFNAH
Sbjct: 1   MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAH 60

Query: 351 GSYSPCLVQKSGWT 392
           GSY  CLVQ+SGWT
Sbjct: 61  GSYCSCLVQRSGWT 74


>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like, partial [Cucumis sativus]
          Length = 595

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = +3

Query: 171 MAEKQLIVAVEGTAAMGPYWHTIVTDYLEKIIRCFCGNELTGQKPSVPNVEFSLVMFNAH 350
           MA+KQLIV VEGTAAMGP+W T+V+DY+EKI+R FCGNELTGQKP   NVEFSLV F+ H
Sbjct: 1   MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 351 GSYSPCLVQKSGWT 392
           GSY  CLVQ++GWT
Sbjct: 61  GSYCGCLVQRTGWT 74


>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Cucumis sativus]
          Length = 858

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = +3

Query: 171 MAEKQLIVAVEGTAAMGPYWHTIVTDYLEKIIRCFCGNELTGQKPSVPNVEFSLVMFNAH 350
           MA+KQLIV VEGTAAMGP+W T+V+DY+EKI+R FCGNELTGQKP   NVEFSLV F+ H
Sbjct: 1   MADKQLIVVVEGTAAMGPFWQTVVSDYIEKIVRSFCGNELTGQKPPTSNVEFSLVTFHTH 60

Query: 351 GSYSPCLVQKSGWT 392
           GSY  CLVQ++GWT
Sbjct: 61  GSYCGCLVQRTGWT 74


>ref|XP_003517999.1| PREDICTED: uncharacterized protein LOC100786254 [Glycine max]
          Length = 3007

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/74 (72%), Positives = 61/74 (82%)
 Frame = +3

Query: 171 MAEKQLIVAVEGTAAMGPYWHTIVTDYLEKIIRCFCGNELTGQKPSVPNVEFSLVMFNAH 350
           MAEKQLIVAVE TAAMGPYW TI+ DYL+K+IRCF GN+ TGQK S   VEF+LV +N H
Sbjct: 1   MAEKQLIVAVESTAAMGPYWDTILMDYLDKMIRCFGGNDSTGQKSSASIVEFALVTYNTH 60

Query: 351 GSYSPCLVQKSGWT 392
           G YS CLVQ+SGWT
Sbjct: 61  GCYSSCLVQRSGWT 74


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