BLASTX nr result

ID: Panax21_contig00027665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027665
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|2...   141   3e-31
ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-30
ref|NP_196350.1| uncharacterized protein [Arabidopsis thaliana] ...   127   4e-27
ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycin...   127   7e-27
emb|CBI15772.3| unnamed protein product [Vitis vinifera]              126   1e-26

>ref|XP_002318188.1| predicted protein [Populus trichocarpa] gi|222858861|gb|EEE96408.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  141 bits (356), Expect = 3e-31
 Identities = 70/113 (61%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = -2

Query: 663 RPVEGEFVPVYVALGMIMLSAGLGLYTAIQHLSWAPGVYVKKSRRERLPEVEEPDHVLDE 484
           + V G+FVPVYVA+GMI +S  LGLYTA Q + +AP V V+K  RE +PEV +PD V+DE
Sbjct: 65  KKVRGDFVPVYVAIGMIAVSISLGLYTAKQQVLYAPNVRVRKKTRETIPEVVDPDKVVDE 124

Query: 483 ADRFVKKSFFRKVAHVQDSSH-GEDVMSDPIRGDVLARKPHAETLKSVGVDPQ 328
           AD+F+KKSFFRKVAHVQ+  H G + + DP R D  ARKP AETLK VGVDP+
Sbjct: 125 ADKFIKKSFFRKVAHVQEFDHYGLEYLPDPTRKDAFARKPRAETLKDVGVDPK 177


>ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|222868763|gb|EEF05894.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  139 bits (351), Expect = 1e-30
 Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = -2

Query: 666 SRPVEGEFVPVYVALGMIMLSAGLGLYTAIQHLSWAPGVYVKKSRRERLPEVEEPDHVLD 487
           S+ V G+FVPVYVA+GMI +S  LGLYTA Q + +AP V V+K  RE +PE+ +PD V+D
Sbjct: 50  SKKVRGDFVPVYVAIGMITVSISLGLYTAKQQVLYAPNVRVRKKTRETVPELVDPDKVVD 109

Query: 486 EADRFVKKSFFRKVAHVQDSSH-GEDVMSDPIRGDVLARKPHAETLKSVGVDPQS 325
           EAD+F+KKSFFRKVAHVQ+  H G   + DP   DV A+KP AETLK VG+DP+S
Sbjct: 110 EADKFIKKSFFRKVAHVQEFDHNGLQYLPDPSHKDVFAQKPRAETLKDVGIDPKS 164


>ref|NP_196350.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7576171|emb|CAB87922.1| putative protein [Arabidopsis
           thaliana] gi|26452141|dbj|BAC43159.1| unknown protein
           [Arabidopsis thaliana] gi|34098921|gb|AAQ56843.1|
           At5g07330 [Arabidopsis thaliana]
           gi|332003754|gb|AED91137.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 165

 Score =  127 bits (320), Expect = 4e-27
 Identities = 63/109 (57%), Positives = 80/109 (73%)
 Frame = -2

Query: 654 EGEFVPVYVALGMIMLSAGLGLYTAIQHLSWAPGVYVKKSRRERLPEVEEPDHVLDEADR 475
           +G+F PVYV++G+I LS   G+YTA  HL   PGV V K  RE +PE+E+PD VL+EADR
Sbjct: 51  KGDFTPVYVSIGLISLSVTFGVYTAYLHLHENPGVRVNKKMRETVPEIEDPDRVLNEADR 110

Query: 474 FVKKSFFRKVAHVQDSSHGEDVMSDPIRGDVLARKPHAETLKSVGVDPQ 328
           F  +S+FRK+AHVQ+    +DV+SDPIR D  A KP A TLK VGVDP+
Sbjct: 111 FANRSWFRKIAHVQEFDK-QDVISDPIRKDQFAHKPRALTLKDVGVDPK 158


>ref|NP_001237926.1| uncharacterized protein LOC100305868 [Glycine max]
           gi|255626835|gb|ACU13762.1| unknown [Glycine max]
          Length = 163

 Score =  127 bits (318), Expect = 7e-27
 Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = -2

Query: 648 EFVPVYVALGMIMLSAGLGLYTAIQHLSWAPGVYVKKSRRERLPEVEEPDHVLDEADRFV 469
           +FV +YVA+GMI LS GLGL+TA Q L  +P V VKK RRE LPEV EPDHV +EA++F+
Sbjct: 54  DFVAIYVAIGMIALSTGLGLHTAWQQLRNSPTVSVKKQRRETLPEVVEPDHVAEEAEKFM 113

Query: 468 KKSFFRKVAHVQDSSHGE-DVMSDPIRGDVLARKPHAETLKSVGVDP 331
           KKSFFRKVAHVQ+ S+ +   +  PI GD     P  ETLKSVGVDP
Sbjct: 114 KKSFFRKVAHVQERSYPDHHQILSPIHGDAYTYTPRVETLKSVGVDP 160


>emb|CBI15772.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  126 bits (316), Expect = 1e-26
 Identities = 66/113 (58%), Positives = 85/113 (75%)
 Frame = -2

Query: 663 RPVEGEFVPVYVALGMIMLSAGLGLYTAIQHLSWAPGVYVKKSRRERLPEVEEPDHVLDE 484
           R V+G+FVPVYVA+GMI +S  LGL TA+  L ++P V+++KSRRE LPEVE+PD V+DE
Sbjct: 122 RGVKGDFVPVYVAMGMIAMSVTLGLCTAMHELMYSPAVHLRKSRRETLPEVEDPDTVVDE 181

Query: 483 ADRFVKKSFFRKVAHVQDSSHGEDVMSDPIRGDVLARKPHAETLKSVGVDPQS 325
            D+FVKKS  RKVAHVQ+     +++  PI  D L R P A TLKSVG+DP+S
Sbjct: 182 GDKFVKKSLLRKVAHVQEL----ELVPHPIE-DPLTRPPRAVTLKSVGIDPKS 229


Top