BLASTX nr result

ID: Panax21_contig00027641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027641
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD72661.1| pollen tube RhoGDI2 [Nicotiana tabacum]                149   2e-34
ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002520560.1| Rho GDP-dissociation inhibitor, putative [Ri...   142   4e-32
ref|XP_002308781.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_003550475.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   137   7e-31

>gb|ABD72661.1| pollen tube RhoGDI2 [Nicotiana tabacum]
          Length = 235

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 3/112 (2%)
 Frame = +1

Query: 115 GTKVGNKT---GEESEIENGDLGEEKISRQMSGNSVYAATDQEEDDEDIEGKLQLGPQCT 285
           GTK G KT     +SEIE+  +GE+ +SRQMS +S+Y   D+EED+ +   K++LGPQCT
Sbjct: 7   GTKGGTKTPIADSDSEIEHEPVGEKNVSRQMSESSLYTTEDEEEDETN--NKIELGPQCT 64

Query: 286 LKDQFEKDKDDESLRRWKEQLLGSVDINSAGETLDPEVKILSLAIKSPGRSD 441
           LK+QFEKDKDDESLRRWKEQLLGSVDINS GE+LDP+VKILSL IKSPGR D
Sbjct: 65  LKEQFEKDKDDESLRRWKEQLLGSVDINSVGESLDPDVKILSLEIKSPGRPD 116


>ref|XP_002322530.1| predicted protein [Populus trichocarpa] gi|222867160|gb|EEF04291.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  145 bits (365), Expect = 4e-33
 Identities = 81/131 (61%), Positives = 95/131 (72%), Gaps = 2/131 (1%)
 Frame = +1

Query: 55  SSASKIMGFDEKNKEGAKEIGTKVGNKTGEESEIENGDLGEEK-ISRQMSGNSVYAATDQ 231
           +S +K MGFDEKNKE   E  T    KT    E  N D  +   ISR+MS +S+Y    +
Sbjct: 8   NSNTKSMGFDEKNKEEVSE--TAATTKTPPNEEENNVDEPKSGGISRKMSESSLYGTDQE 65

Query: 232 EEDDEDI-EGKLQLGPQCTLKDQFEKDKDDESLRRWKEQLLGSVDINSAGETLDPEVKIL 408
           EEDDE+  E K++LGPQCTLK+Q EKDKDDESLRRWKEQLLG+VDI +AGETL+PEVKIL
Sbjct: 66  EEDDEETNERKIELGPQCTLKEQLEKDKDDESLRRWKEQLLGAVDIEAAGETLEPEVKIL 125

Query: 409 SLAIKSPGRSD 441
           SL IKS GR D
Sbjct: 126 SLEIKSSGRPD 136


>ref|XP_002520560.1| Rho GDP-dissociation inhibitor, putative [Ricinus communis]
           gi|223540220|gb|EEF41793.1| Rho GDP-dissociation
           inhibitor, putative [Ricinus communis]
          Length = 243

 Score =  142 bits (357), Expect = 4e-32
 Identities = 78/126 (61%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
 Frame = +1

Query: 73  MGFDEKNKEGAKEIGTKVGNKTGEESEIENGDLGEEKI---SRQMSGNSVYAATDQEEDD 243
           MG DE N E   E  T            E   + E KI   SRQMS +S+YA   +EEDD
Sbjct: 1   MGSDENNSEEVSETKTASAKSPSAVGAEEQHRVDESKIGGLSRQMSESSIYATDQEEEDD 60

Query: 244 EDIEGKLQLGPQCTLKDQFEKDKDDESLRRWKEQLLGSVDINSAGETLDPEVKILSLAIK 423
           E  E K++LGPQ TLK+Q EKDKDDESLRRWKEQLLGSVDIN+ GETLDPEVKI+SLAIK
Sbjct: 61  E--ERKIELGPQYTLKEQLEKDKDDESLRRWKEQLLGSVDINAVGETLDPEVKIISLAIK 118

Query: 424 SPGRSD 441
           SPGR D
Sbjct: 119 SPGRDD 124


>ref|XP_002308781.1| predicted protein [Populus trichocarpa] gi|222854757|gb|EEE92304.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  140 bits (354), Expect = 8e-32
 Identities = 80/125 (64%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
 Frame = +1

Query: 73  MGFDEKNKEGAKEIGTKVGNKTGEESEIENGDLGEEKISRQMSGNSVYAATDQEE--DDE 246
           MGFDEKNK+   E  TK   KT    E    +     ISR+MS +S+YA TDQEE  DDE
Sbjct: 1   MGFDEKNKDEVSE--TKATTKTPPNEEHNVDEPKSGGISRKMSESSLYA-TDQEEEDDDE 57

Query: 247 DIEGKLQLGPQCTLKDQFEKDKDDESLRRWKEQLLGSVDINSAGETLDPEVKILSLAIKS 426
             E K++LGPQ TLK+Q EKDKDDESLRRWKEQLLG+VDI + GETL+PEVKILSL IKS
Sbjct: 58  SHERKIELGPQYTLKEQLEKDKDDESLRRWKEQLLGAVDIEAVGETLEPEVKILSLEIKS 117

Query: 427 PGRSD 441
           PGR D
Sbjct: 118 PGRPD 122


>ref|XP_003550475.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max]
          Length = 249

 Score =  137 bits (346), Expect = 7e-31
 Identities = 76/139 (54%), Positives = 97/139 (69%)
 Frame = +1

Query: 25  MSLAVEIVSGSSASKIMGFDEKNKEGAKEIGTKVGNKTGEESEIENGDLGEEKISRQMSG 204
           MSLA+ +VS   ++  MGFD+   +   E+  +   KT    E E+GD     +SR MS 
Sbjct: 1   MSLAIGVVSNCKSN--MGFDDNKGKEVPEM--QHSGKTVHVHEDESGDERGTSLSRHMSE 56

Query: 205 NSVYAATDQEEDDEDIEGKLQLGPQCTLKDQFEKDKDDESLRRWKEQLLGSVDINSAGET 384
            S+ A    E++DED+E ++ LGPQCTLK+Q EKDKDDESLRRWKEQLLGSVD+ S GE+
Sbjct: 57  GSIAAT---EDEDEDVERRIDLGPQCTLKEQLEKDKDDESLRRWKEQLLGSVDMTSVGES 113

Query: 385 LDPEVKILSLAIKSPGRSD 441
           L+PEVKILSLAIK+ GR D
Sbjct: 114 LEPEVKILSLAIKAAGRED 132


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