BLASTX nr result

ID: Panax21_contig00027631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027631
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase...   101   6e-20
ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase...   101   6e-20
ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase ...   100   2e-19
gb|EEE61829.1| hypothetical protein OsJ_16474 [Oryza sativa Japo...    99   4e-19
gb|EEC78168.1| hypothetical protein OsI_17750 [Oryza sativa Indi...    99   4e-19

>ref|XP_004158798.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 427

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/80 (65%), Positives = 57/80 (71%)
 Frame = +2

Query: 227 SFFVRSIXXXXXXXXXXXXXXEEQKISKKLSEQSSWEAKDSDGNDYLYRLGKESDNMNIA 406
           SF VRS               E  K  K+LSEQSSWEAKDS+G DYLYRLG E+DNMNIA
Sbjct: 29  SFSVRSSNDVSGEVGSGGDGSESAKRPKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIA 88

Query: 407 VGARAGVIDDLFAGKFLGRD 466
           VGARAGVIDD+FAG FLG+D
Sbjct: 89  VGARAGVIDDVFAGNFLGKD 108


>ref|XP_004135891.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic-like [Cucumis sativus]
          Length = 426

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/80 (65%), Positives = 57/80 (71%)
 Frame = +2

Query: 227 SFFVRSIXXXXXXXXXXXXXXEEQKISKKLSEQSSWEAKDSDGNDYLYRLGKESDNMNIA 406
           SF VRS               E  K  K+LSEQSSWEAKDS+G DYLYRLG E+DNMNIA
Sbjct: 29  SFSVRSSNDVSGEIGSGGDGSESAKRPKRLSEQSSWEAKDSEGKDYLYRLGSEADNMNIA 88

Query: 407 VGARAGVIDDLFAGKFLGRD 466
           VGARAGVIDD+FAG FLG+D
Sbjct: 89  VGARAGVIDDVFAGNFLGKD 108


>ref|XP_002512778.1| Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           precursor, putative [Ricinus communis]
           gi|223547789|gb|EEF49281.1| Ribulose bisphosphate
           carboxylase/oxygenase activase, chloroplast precursor,
           putative [Ricinus communis]
          Length = 428

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/60 (81%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
 Frame = +2

Query: 290 EEQKISKK-LSEQSSWEAKDSDGNDYLYRLGKESDNMNIAVGARAGVIDDLFAGKFLGRD 466
           E+QK +K+ LSEQSSWE KDS+GNDYLYRLGKE+DNMNIAVGAR GVID LFAG FLGRD
Sbjct: 52  EQQKTAKRQLSEQSSWETKDSEGNDYLYRLGKEADNMNIAVGARPGVIDPLFAGNFLGRD 111


>gb|EEE61829.1| hypothetical protein OsJ_16474 [Oryza sativa Japonica Group]
          Length = 456

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/59 (72%), Positives = 55/59 (93%)
 Frame = +2

Query: 290 EEQKISKKLSEQSSWEAKDSDGNDYLYRLGKESDNMNIAVGARAGVIDDLFAGKFLGRD 466
           EE++  ++LS+QSSWEAKDS+G+DYLYRLGKE+DNMNIAVGAR+G++DDLF G FLG+D
Sbjct: 65  EEEEEGRRLSKQSSWEAKDSEGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGNFLGKD 123


>gb|EEC78168.1| hypothetical protein OsI_17750 [Oryza sativa Indica Group]
          Length = 456

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/59 (72%), Positives = 55/59 (93%)
 Frame = +2

Query: 290 EEQKISKKLSEQSSWEAKDSDGNDYLYRLGKESDNMNIAVGARAGVIDDLFAGKFLGRD 466
           EE++  ++LS+QSSWEAKDS+G+DYLYRLGKE+DNMNIAVGAR+G++DDLF G FLG+D
Sbjct: 65  EEEEEGRRLSKQSSWEAKDSEGDDYLYRLGKEADNMNIAVGARSGIVDDLFVGNFLGKD 123


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