BLASTX nr result

ID: Panax21_contig00027587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027587
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncat...    64   2e-08
gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidop...    61   8e-08
ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arab...    61   8e-08
ref|NP_566579.1| 50S ribosomal protein L3-2 [Arabidopsis thalian...    61   8e-08
ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chlor...    60   2e-07

>ref|XP_003618278.1| 50S ribosomal protein L3-2 [Medicago truncatula]
           gi|355493293|gb|AES74496.1| 50S ribosomal protein L3-2
           [Medicago truncatula]
          Length = 294

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -1

Query: 501 SSLPFPTYFAPEDEDTTEWEPLVADLGDADPFMAAD 394
           S LPFPTYF PEDEDT + EPL+ADLGD DPFM  D
Sbjct: 259 SILPFPTYFVPEDEDTDDMEPLIADLGDVDPFMVVD 294


>gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana]
          Length = 134

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 501 SSLPFPTYFAPEDEDTTEWEPLVADLGDADPFMAAD 394
           S LPFPTY APEDED +E EPLVADLG+ DPFM A+
Sbjct: 99  SKLPFPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 134


>ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
           lyrata] gi|297331053|gb|EFH61472.1| hypothetical protein
           ARALYDRAFT_479224 [Arabidopsis lyrata subsp. lyrata]
          Length = 323

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 501 SSLPFPTYFAPEDEDTTEWEPLVADLGDADPFMAAD 394
           S LPFPTY APEDED +E EPLVADLG+ DPFM A+
Sbjct: 288 SKLPFPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 323


>ref|NP_566579.1| 50S ribosomal protein L3-2 [Arabidopsis thaliana]
           gi|42559534|sp|Q9LRN8.1|RK3B_ARATH RecName: Full=50S
           ribosomal protein L3-2, chloroplastic; Flags: Precursor
           gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3
           [Arabidopsis thaliana] gi|332642436|gb|AEE75957.1| 50S
           ribosomal protein L3-2 [Arabidopsis thaliana]
          Length = 324

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -1

Query: 501 SSLPFPTYFAPEDEDTTEWEPLVADLGDADPFMAAD 394
           S LPFPTY APEDED +E EPLVADLG+ DPFM A+
Sbjct: 289 SKLPFPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324


>ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 299

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -1

Query: 501 SSLPFPTYFAPEDEDTTEWEPLVADLGDADPFMAAD 394
           S LPFPTYF PEDEDT   +PLVA+LGD DPFM  D
Sbjct: 264 SLLPFPTYFVPEDEDTDNLKPLVAELGDVDPFMVTD 299


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