BLASTX nr result

ID: Panax21_contig00027561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027561
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB77426.1| Skp1-like protein 1 [Petunia integrifolia subsp. ...   202   1e-49
gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. ...   200   5e-49
gb|ACA61785.1| SKP1-like protein 3 [Petunia x hybrida]                199   1e-48
ref|XP_002305525.1| predicted protein [Populus trichocarpa] gi|2...   198   1e-48
gb|ABK92824.1| unknown [Populus trichocarpa]                          198   1e-48

>gb|ABB77426.1| Skp1-like protein 1 [Petunia integrifolia subsp. inflata]
           gi|169647579|gb|ACA61786.1| SKP1-like protein 4 [Petunia
           x hybrida]
          Length = 156

 Score =  202 bits (513), Expect = 1e-49
 Identities = 99/155 (63%), Positives = 123/155 (79%), Gaps = 7/155 (4%)
 Frame = -3

Query: 967 SEKKFLTLKTGDGEEFVVEESAAVLSQTIKNMVEDDCASTTIPVPNIDGKTMAKVIEYCN 788
           S  K + LK+ DGE F VEES A+ SQTIK+M+EDDCA ++IP+PN+  K +AKVIEYC 
Sbjct: 2   STSKMIVLKSSDGETFEVEESVALESQTIKHMIEDDCADSSIPLPNVTSKILAKVIEYCK 61

Query: 787 KHVE---ESDDKILEE----FDKEFVNVDQENLYHLLIAANFLHIKDLLDRACQQVADMI 629
           +HVE   ++DDK+ EE    FD EFV VDQ  L+ L++AAN+L+IK LLD  CQ VADMI
Sbjct: 62  RHVEAAAKTDDKVSEEDLKNFDAEFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMI 121

Query: 628 KGKTPEQIRQTFHIKNDFTPEEEAEIRKENAWAFE 524
           KGKTPE+IR+TF+IKNDFTPEEE E+R+ENAWAFE
Sbjct: 122 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 156


>gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. inflata]
           gi|253796264|gb|ACT35736.1| SKP1-like 2 [Petunia x
           hybrida]
          Length = 155

 Score =  200 bits (508), Expect = 5e-49
 Identities = 98/154 (63%), Positives = 122/154 (79%), Gaps = 6/154 (3%)
 Frame = -3

Query: 967 SEKKFLTLKTGDGEEFVVEESAAVLSQTIKNMVEDDCASTTIPVPNIDGKTMAKVIEYCN 788
           S  K + LK+ DGE F VEES A+ SQTIK+M+EDDCA T+IP+PN+  K +AKVIEYC 
Sbjct: 2   STSKMIVLKSSDGETFQVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCK 61

Query: 787 KHVE--ESDDKILEE----FDKEFVNVDQENLYHLLIAANFLHIKDLLDRACQQVADMIK 626
           +HVE  +S+DK  E+    FD +FV VDQ  L+ L++AAN+L+IK LLD  CQ VADMIK
Sbjct: 62  RHVEANKSEDKASEDELKSFDSDFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMIK 121

Query: 625 GKTPEQIRQTFHIKNDFTPEEEAEIRKENAWAFE 524
           GKTPE+IR+TF+IKNDFTPEEE E+R+ENAWAFE
Sbjct: 122 GKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155


>gb|ACA61785.1| SKP1-like protein 3 [Petunia x hybrida]
          Length = 155

 Score =  199 bits (505), Expect = 1e-48
 Identities = 97/154 (62%), Positives = 122/154 (79%), Gaps = 6/154 (3%)
 Frame = -3

Query: 967 SEKKFLTLKTGDGEEFVVEESAAVLSQTIKNMVEDDCASTTIPVPNIDGKTMAKVIEYCN 788
           S  K + LK+ DGE F VEES A+ SQTIK+M+EDDCA T+IP+PN+  K +AKVIEYC 
Sbjct: 2   STSKMIVLKSSDGETFQVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCK 61

Query: 787 KHVE--ESDDKILEE----FDKEFVNVDQENLYHLLIAANFLHIKDLLDRACQQVADMIK 626
           +HVE  +++DK  E+    FD +FV VDQ  L+ L++AAN+L+IK LLD  CQ VADMIK
Sbjct: 62  RHVEANKAEDKASEDELKSFDSDFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMIK 121

Query: 625 GKTPEQIRQTFHIKNDFTPEEEAEIRKENAWAFE 524
           GKTPE+IR+TF+IKNDFTPEEE E+R+ENAWAFE
Sbjct: 122 GKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155


>ref|XP_002305525.1| predicted protein [Populus trichocarpa] gi|222848489|gb|EEE86036.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  198 bits (504), Expect = 1e-48
 Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 12/160 (7%)
 Frame = -3

Query: 967 SEKKFLTLKTGDGEEFVVEESAAVLSQTIKNMVEDDCASTTIPVPNIDGKTMAKVIEYCN 788
           SE K +TLK+ DGE FVV+E+ AV SQTIK+M+EDDCA   IP+PN+  K +AKVIEYC 
Sbjct: 2   SESKKITLKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCK 61

Query: 787 KHVEESDDK------------ILEEFDKEFVNVDQENLYHLLIAANFLHIKDLLDRACQQ 644
           KHVE   DK             L+ +D EFV VDQ  L+ L++AAN+L+IK LLD  CQ 
Sbjct: 62  KHVEAGSDKEKNVTGVAEKDESLKSWDTEFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 121

Query: 643 VADMIKGKTPEQIRQTFHIKNDFTPEEEAEIRKENAWAFE 524
           VADMIKGKTPE+IR+TF+IKNDFTPEEE E+R+EN WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


>gb|ABK92824.1| unknown [Populus trichocarpa]
          Length = 161

 Score =  198 bits (504), Expect = 1e-48
 Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 12/160 (7%)
 Frame = -3

Query: 967 SEKKFLTLKTGDGEEFVVEESAAVLSQTIKNMVEDDCASTTIPVPNIDGKTMAKVIEYCN 788
           SE K +TLK+ DGE FVV+E+ AV SQTIK+M+EDDCA   IP+PN+  K +AKVIEYC 
Sbjct: 2   SESKKITLKSSDGETFVVDEAVAVESQTIKHMIEDDCADNEIPLPNVTSKILAKVIEYCK 61

Query: 787 KHVEESDDK------------ILEEFDKEFVNVDQENLYHLLIAANFLHIKDLLDRACQQ 644
           KHVE   DK             L+ +D EFV VDQ  L+ L++AAN+L+IK LLD  CQ 
Sbjct: 62  KHVEAGSDKEKNVTGVTEKDESLKSWDTEFVKVDQNTLFDLILAANYLNIKGLLDLTCQT 121

Query: 643 VADMIKGKTPEQIRQTFHIKNDFTPEEEAEIRKENAWAFE 524
           VADMIKGKTPE+IR+TF+IKNDFTPEEE E+R+EN WAFE
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161


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