BLASTX nr result

ID: Panax21_contig00027553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027553
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              185   5e-45
gb|ACD56616.1| hypothetical protein [Gossypioides kirkii]             152   5e-35
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   145   8e-33
ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arab...   128   1e-27
ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arab...   128   1e-27

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  185 bits (470), Expect = 5e-45
 Identities = 99/158 (62%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
 Frame = +1

Query: 1    KEHTIPCRYACAFALAASDSEKDLQEDSLKYMAEFIRDYRIEAHLVQNAANQGG-MTDDP 177
            KEH IP RYACAFA A  D  KDLQEDSLKYMAEF+++YR EA + Q +  QGG +TD P
Sbjct: 900  KEHAIPSRYACAFAFAGPDCPKDLQEDSLKYMAEFMKEYRKEAQVRQTSVMQGGTITDYP 959

Query: 178  VYIVVFLIHVLAHDRGFPPEG-EDEETFIQFCSPLLLTLQALVNTNFVDGDKHV-NNAVS 351
             Y+VVFL+HVLAHD  FP E  +DEE F QFCSPL   LQ LVN +FVDG   + N+A+S
Sbjct: 960  AYMVVFLVHVLAHDTNFPSETCQDEEMFAQFCSPLFFALQVLVNASFVDGGMDLDNDAIS 1019

Query: 352  NLKSIFNAIKRADDAVNAQATPKLHTLADFGISFVNTL 465
             + SIF AIKRADDAV+AQ T  LH LAD GIS +  L
Sbjct: 1020 CIFSIFRAIKRADDAVDAQRTLNLHMLADIGISILKAL 1057


>gb|ACD56616.1| hypothetical protein [Gossypioides kirkii]
          Length = 262

 Score =  152 bits (384), Expect = 5e-35
 Identities = 87/157 (55%), Positives = 104/157 (66%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   KEHTIPCRYACAFALAASDSEKDLQEDSLKYMAEFIRDYRIEAHLVQNAANQGG-MTDDP 177
           KE  IP RYACAF LA +   KD Q  S KYM EFI++Y  EA + + +  QGG + D P
Sbjct: 72  KERVIPIRYACAFTLATAIGFKDRQH-SFKYMVEFIKEYNREAQIRRTSMVQGGSIVDYP 130

Query: 178 VYIVVFLIHVLAHDRGFPPEG-EDEETFIQFCSPLLLTLQALVNTNFVDGDKH-VNNAVS 351
            Y+ VFLIH+LAHD GFPPEG +DE  + QFCSPLL  L   +++N VD D   VN A  
Sbjct: 131 AYLAVFLIHLLAHDDGFPPEGCQDEARYAQFCSPLLFFLHTSISSNNVDDDMDIVNVAAF 190

Query: 352 NLKSIFNAIKRADDAVNAQATPKLHTLADFGISFVNT 462
            L  IF AIKRA DAV+ Q TP+LH LAD GIS VN+
Sbjct: 191 YLYYIFRAIKRAKDAVDVQRTPRLHFLADVGISGVNS 227


>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score =  145 bits (365), Expect = 8e-33
 Identities = 79/131 (60%), Positives = 95/131 (72%), Gaps = 3/131 (2%)
 Frame = +1

Query: 82   SLKYMAEFIRDYRIEAHLVQNAANQGG-MTDDPVYIVVFLIHVLAHDRGFPPEG-EDEET 255
            SLKYMAEF+++YR EA + Q +  QGG +TD P Y+VVFL+HVLAHD  FP E  +DEE 
Sbjct: 859  SLKYMAEFMKEYRKEAQVRQTSVMQGGTITDYPAYMVVFLVHVLAHDTNFPSETCQDEEM 918

Query: 256  FIQFCSPLLLTLQALVNTNFVDGDKHVNN-AVSNLKSIFNAIKRADDAVNAQATPKLHTL 432
            F QFCSPL   LQ LVN +FVDG   ++N A+S + SIF AIKRADDAV+AQ T  LH L
Sbjct: 919  FAQFCSPLFFALQVLVNASFVDGGMDLDNDAISCIFSIFRAIKRADDAVDAQRTLNLHML 978

Query: 433  ADFGISFVNTL 465
            AD GIS +  L
Sbjct: 979  ADIGISILKAL 989


>ref|NP_001185421.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197878|gb|AEE35999.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1424

 Score =  128 bits (321), Expect = 1e-27
 Identities = 70/157 (44%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
 Frame = +1

Query: 4    EHTIPCRYACAFALAASDSEKDLQEDSLKYMAEFIRDYRIEAHLVQNAANQGGMTDDPVY 183
            EH IP RYACAF+ + S   +DL +DS +Y+  FI     E+   ++      +TD PVY
Sbjct: 945  EHMIPSRYACAFSFSLSSPCRDLHDDSFRYINGFINKATRESRTCRDLDQGESLTDSPVY 1004

Query: 184  IVVFLIHVLAHDRGFPPEG-EDEETFIQFCSPLLLTLQALVNTNFVDGDKHVNNAVSNLK 360
            + VFLIHVLAHD  FP E   DE  + +FC PL   LQ L++ N  +    +      L 
Sbjct: 1005 MTVFLIHVLAHDPEFPSEDCRDEHIYARFCGPLFSVLQVLLSIN--NNGFTIKETAPFLF 1062

Query: 361  SIFNAIKRADDAVNAQATPKLHTLADFGISFVNTLKN 471
             IF AIKRA+DAV+++ TP+LH LAD G S VN L +
Sbjct: 1063 CIFRAIKRAEDAVDSRKTPRLHILADIGYSAVNILNS 1099


>ref|NP_001185420.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana]
            gi|332197877|gb|AEE35998.1| sister chromatid cohesion
            protein PDS5 [Arabidopsis thaliana]
          Length = 1410

 Score =  128 bits (321), Expect = 1e-27
 Identities = 70/157 (44%), Positives = 93/157 (59%), Gaps = 1/157 (0%)
 Frame = +1

Query: 4    EHTIPCRYACAFALAASDSEKDLQEDSLKYMAEFIRDYRIEAHLVQNAANQGGMTDDPVY 183
            EH IP RYACAF+ + S   +DL +DS +Y+  FI     E+   ++      +TD PVY
Sbjct: 931  EHMIPSRYACAFSFSLSSPCRDLHDDSFRYINGFINKATRESRTCRDLDQGESLTDSPVY 990

Query: 184  IVVFLIHVLAHDRGFPPEG-EDEETFIQFCSPLLLTLQALVNTNFVDGDKHVNNAVSNLK 360
            + VFLIHVLAHD  FP E   DE  + +FC PL   LQ L++ N  +    +      L 
Sbjct: 991  MTVFLIHVLAHDPEFPSEDCRDEHIYARFCGPLFSVLQVLLSIN--NNGFTIKETAPFLF 1048

Query: 361  SIFNAIKRADDAVNAQATPKLHTLADFGISFVNTLKN 471
             IF AIKRA+DAV+++ TP+LH LAD G S VN L +
Sbjct: 1049 CIFRAIKRAEDAVDSRKTPRLHILADIGYSAVNILNS 1085


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