BLASTX nr result

ID: Panax21_contig00027542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027542
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis ...    78   7e-13
ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002310637.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera]
          Length = 1197

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
 Frame = +3

Query: 75  PQTKNQFKKM----SQKAQGLPYFQSIKSLPVDFRFMGSEESHSYGLSEAVDMNTTSMIS 242
           P ++N  +KM    + +++  P  QSIKSLPV FRF GS  S   G S+ V+   + +I 
Sbjct: 9   PGSQNSSEKMPKSFASESRSPPSLQSIKSLPVGFRFTGSPTSGVSGQSDDVNTENSDVIC 68

Query: 243 DSIPENGKL------ACEDIGNKIDRNDDDSPYSSVTLPVEESPSTSDEN 374
           DSIPENG L      A ED   ++D+  DD+PY   T+ ++E PS  DE+
Sbjct: 69  DSIPENGDLSGEVVGAIEDGAGEMDQASDDTPYDRKTIAIDERPSVGDED 118


>ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|222856601|gb|EEE94148.1|
           predicted protein [Populus trichocarpa]
          Length = 1173

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = +3

Query: 102 MSQKAQGLPYFQSIKSLPVDFRFMGSEESHSYGLSEAVDMNTTSMISDSIPENGKL---- 269
           + +K+Q LP FQSIKSLPVDFRF+GS  S     +  V+ NT  +   S+PE   L    
Sbjct: 2   LQKKSQVLPSFQSIKSLPVDFRFVGSPTSEQSENANLVNSNTACL---SVPEKNDLENGL 58

Query: 270 ---ACEDIGNKIDRNDDDSPYSSVTLPVEESPSTSDEN 374
              A + +GN +   ++DSPYS   + VE+ PS  DE+
Sbjct: 59  VEGAEDSVGNDV---NEDSPYSQAAILVEQRPSVGDED 93


>ref|XP_002310637.1| predicted protein [Populus trichocarpa] gi|222853540|gb|EEE91087.1|
           predicted protein [Populus trichocarpa]
          Length = 1174

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
 Frame = +3

Query: 102 MSQKAQGLPYFQSIKSLPVDFRFMGSEESHSYGLSEAVDMNTTSMISDSIPENGKL---- 269
           M  K+Q LP  +SIKSLPVDFRF+GS  S     S  V    ++ +  S PE   +    
Sbjct: 1   MLPKSQVLPSLESIKSLPVDFRFVGSPTSEQLEKSVDVKSLNSNAVCLSFPEKNDIGNGL 60

Query: 270 ---ACEDIGNKIDRNDDDSPYSSVTLPVEESPSTSDEN 374
              A + +GN +    +DSPYS   + +E+ PS  DE+
Sbjct: 61  VEGAEDSVGNDV---SEDSPYSRTAILIEQRPSVGDED 95


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