BLASTX nr result

ID: Panax21_contig00027537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027537
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002520708.1| conserved hypothetical protein [Ricinus comm...    82   6e-14
ref|XP_003606608.1| NDX1 homeobox protein [Medicago truncatula] ...    80   2e-13
emb|CBI32285.3| unnamed protein product [Vitis vinifera]               79   4e-13

>ref|XP_002302816.1| predicted protein [Populus trichocarpa] gi|222844542|gb|EEE82089.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/77 (51%), Positives = 57/77 (74%)
 Frame = -3

Query: 439 KEEKDLFLNSFSKCLQKEFPKLADGFSSKSATEKTAAISRNLRSLLIHAESLIRSFLNEE 260
           ++E++LFL+ F +C++ +  K   GFS  S  ++   + RNLRSLL HAESLI +FLNEE
Sbjct: 507 EQERNLFLHKFLECMRMDPSKSLPGFSFTSGAQRAVTVCRNLRSLLSHAESLIPNFLNEE 566

Query: 259 DVQLLRVFLSQLEPIIS 209
           DVQLLRVF +QL+ +I+
Sbjct: 567 DVQLLRVFFNQLQSLIN 583


>ref|XP_002320379.1| predicted protein [Populus trichocarpa] gi|222861152|gb|EEE98694.1|
           predicted protein [Populus trichocarpa]
          Length = 1326

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
 Frame = -3

Query: 439 KEEKDLFLNSFSKCLQKEFPKLADGFSSKSATEKTAAISRNLRSLLIHAESLIRSFLNEE 260
           ++E++LFL+ F +C++ +  K   GFS  S   +   + RNLRSLL HAESLI +FLNEE
Sbjct: 612 EQERNLFLHKFLECMRMDPSKSLPGFSFTSGALRAGTVCRNLRSLLSHAESLIPNFLNEE 671

Query: 259 DVQLLRVFLSQLEPIIS------IQVQERPSSFFFQVSISLYCK 146
           DVQLLRVF +QL+ +I+       QVQE  S     +S+  +C+
Sbjct: 672 DVQLLRVFFNQLQSLINPTDFEENQVQEIKSE--RSISLDKFCR 713


>ref|XP_002520708.1| conserved hypothetical protein [Ricinus communis]
           gi|223540093|gb|EEF41670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 957

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/102 (44%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
 Frame = -3

Query: 439 KEEKDLFLNSFSKCLQKEFPKLADGFSSKSATEKTAAISRNLRSLLIHAESLIRSFLNEE 260
           ++E++LFL+ F +C++ +  +    FS  S   K   + RNLRSLL HAESLI +FLNEE
Sbjct: 481 EQERNLFLHKFLECMRMDPSETLPEFSFTSDANKANTVCRNLRSLLSHAESLIPNFLNEE 540

Query: 259 DVQLLRVFLSQLEPIISI----QVQERPSSFFFQVSISLYCK 146
           DVQLLRVF +QL+ +I+     Q Q +   F   +S+  +CK
Sbjct: 541 DVQLLRVFFNQLQSLINTADFEQNQVQEIKFERSISLEKFCK 582


>ref|XP_003606608.1| NDX1 homeobox protein [Medicago truncatula]
           gi|355507663|gb|AES88805.1| NDX1 homeobox protein
           [Medicago truncatula]
          Length = 624

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
 Frame = -3

Query: 439 KEEKDLFLNSFSKCLQKEFPKLADGFSSKSATEKTAAISRNLRSLLIHAESLIRSFLNEE 260
           + E++ F  +F +CLQ +  KL  GFS  S   K A +S+NLRSLL HAESL+ +FL+EE
Sbjct: 152 ESERNFFFRTFLECLQMDLSKLLPGFSFASDAPKAATVSKNLRSLLSHAESLMPNFLDEE 211

Query: 259 DVQLLRVFLSQLEPIISI------QVQERPSSFFFQVSISLYCKFINIYF 128
           DVQ+LRVF  +++ + +       +VQ+R   F   +S   + K IN ++
Sbjct: 212 DVQILRVFFREIQTLFTSSGSGGNRVQDR--KFEESLSWDKFSKLINKHY 259


>emb|CBI32285.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/77 (54%), Positives = 55/77 (71%)
 Frame = -3

Query: 439 KEEKDLFLNSFSKCLQKEFPKLADGFSSKSATEKTAAISRNLRSLLIHAESLIRSFLNEE 260
           ++EKDLFL+   +CLQ E P+    FS  S  +K A + +NLRSLL HAESLI  FLNEE
Sbjct: 477 EQEKDLFLHKCLECLQMERPR----FSFSSDAQKAATVCKNLRSLLGHAESLIPLFLNEE 532

Query: 259 DVQLLRVFLSQLEPIIS 209
           DVQLLRVF  +++ +I+
Sbjct: 533 DVQLLRVFFKEIQSLIT 549


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