BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027535
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30994.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec...    79   4e-13
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec...    74   2e-11
ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec...    68   7e-10

>emb|CBI30994.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/118 (40%), Positives = 51/118 (43%)
 Frame = +3

Query: 3   LEPDSELMEISLXXXXXXXXXXXXGVNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXXQ 182
           LEPDSELM ISL            GVNPDNG ENPDIVP                    Q
Sbjct: 311 LEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQ 370

Query: 183 GFPVAAQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGSLTPDGF 356
               AAQ       +MWPPHMPLA                    ADGFSY ++ PDGF
Sbjct: 371 ALGPAAQGRGRGRGIMWPPHMPLA--RGARPIPSMRGFPPVMMGADGFSYSAVPPDGF 426


>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Vitis vinifera]
          Length = 673

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/118 (40%), Positives = 51/118 (43%)
 Frame = +3

Query: 3   LEPDSELMEISLXXXXXXXXXXXXGVNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXXQ 182
           LEPDSELM ISL            GVNPDNG ENPDIVP                    Q
Sbjct: 384 LEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQ 443

Query: 183 GFPVAAQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGSLTPDGF 356
               AAQ       +MWPPHMPLA                    ADGFSY ++ PDGF
Sbjct: 444 ALGPAAQGRGRGRGIMWPPHMPLA--RGARPIPSMRGFPPVMMGADGFSYSAVPPDGF 499


>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 681

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/118 (38%), Positives = 47/118 (39%)
 Frame = +3

Query: 3   LEPDSELMEISLXXXXXXXXXXXXGVNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXXQ 182
           LEPDSELM IS+            GVNPDNG ENPDIVP                     
Sbjct: 396 LEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGH 455

Query: 183 GFPVAAQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGSLTPDGF 356
           G   A Q       MMWPPHMPL                      DG SYG + PDGF
Sbjct: 456 GVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPVGPDGF 510


>ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|222847591|gb|EEE85138.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/118 (38%), Positives = 50/118 (42%)
 Frame = +3

Query: 3   LEPDSELMEISLXXXXXXXXXXXXGVNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXXQ 182
           LEPDSELM +SL            GVNPD+G ENPDIVP                    Q
Sbjct: 397 LEPDSELMAVSLAAEAKREEEKEKGVNPDSGGENPDIVPFEDNEEEEEEESEEEEESFGQ 456

Query: 183 GFPVAAQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGSLTPDGF 356
               AAQ       MMWP H P+A                    ADGFSYG++TPD F
Sbjct: 457 PLGPAAQGRGRGRGMMWPSHNPMA--RGARPIPGIRGFPPMMMGADGFSYGAVTPDSF 512


>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Glycine max]
          Length = 691

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/121 (37%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   LEPDSELMEISLXXXXXXXXXXXXGVNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXXQ 182
           LEPDSELM IS+            GVNPDNG ENPDIVP                     
Sbjct: 396 LEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFSH 455

Query: 183 GFPVAAQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSY---GSLTPDG 353
           G   A Q       MMWPPHMPL                      DG SY   G + PDG
Sbjct: 456 GVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPVGPVGPDG 512

Query: 354 F 356
           F
Sbjct: 513 F 513