BLASTX nr result

ID: Panax21_contig00027531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027531
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis ...    62   4e-08
ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002273898.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera]
          Length = 1197

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
 Frame = -3

Query: 301 PQTKNQFKKM----LQKAQGLPYFQSMKSLPVDFRFMGSEDSHSYGLSEAVDMNTTSMIS 134
           P ++N  +KM      +++  P  QS+KSLPV FRF GS  S   G S+ V+   + +I 
Sbjct: 9   PGSQNSSEKMPKSFASESRSPPSLQSIKSLPVGFRFTGSPTSGVSGQSDDVNTENSDVIC 68

Query: 133 DSIHENGKL------ACEXXXXXXXXXXXDSPYSSVTLPVEERPSTSDEN 2
           DSI ENG L      A E           D+PY   T+ ++ERPS  DE+
Sbjct: 69  DSIPENGDLSGEVVGAIEDGAGEMDQASDDTPYDRKTIAIDERPSVGDED 118


>ref|XP_002307152.1| predicted protein [Populus trichocarpa] gi|222856601|gb|EEE94148.1|
           predicted protein [Populus trichocarpa]
          Length = 1173

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
 Frame = -3

Query: 274 MLQK-AQGLPYFQSMKSLPVDFRFMGSEDSHSYGLSEAVDMNTT--SMISDSIHENGKLA 104
           MLQK +Q LP FQS+KSLPVDFRF+GS  S     +  V+ NT   S+   +  ENG L 
Sbjct: 1   MLQKKSQVLPSFQSIKSLPVDFRFVGSPTSEQSENANLVNSNTACLSVPEKNDLENG-LV 59

Query: 103 CEXXXXXXXXXXXDSPYSSVTLPVEERPSTSDEN 2
                        DSPYS   + VE+RPS  DE+
Sbjct: 60  EGAEDSVGNDVNEDSPYSQAAILVEQRPSVGDED 93


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