BLASTX nr result

ID: Panax21_contig00027499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027499
         (2323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33534.3| unnamed protein product [Vitis vinifera]              585   e-164
ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   585   e-164
ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|2...   547   e-153
ref|XP_002532468.1| pentatricopeptide repeat-containing protein,...   536   e-150
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...   535   e-149

>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  585 bits (1508), Expect = e-164
 Identities = 277/403 (68%), Positives = 332/403 (82%)
 Frame = -3

Query: 2321 YGFPGPSVKFFRWAGYQLNDKHSPYSWNLVVDLLGKNSLFDAMWDAIKSMKKEGLLSLAT 2142
            YGFPG +VKFFRW+G+QLND HSPYSWNLVVD+LGKN LFDAMWDA+KSMKK+GLLSLAT
Sbjct: 102  YGFPGSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLAT 161

Query: 2141 FASVFSSYVISDCVQEAIMTFEVMEQYGCPQDIVALNSLLSAICRDGKVVQAKDFLNIAK 1962
            FAS+FSSYVI+D V+EAIMTF+VMEQYGCP+DIVALNSLLSAICRDG+ VQA +FL   +
Sbjct: 162  FASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVR 221

Query: 1961 EKIRTDSDTYAILLEGWENEKDVAGARQTFTEMVMDIGWDPSNVPAYDSYLITLLKGPDG 1782
              IR D+DTYAILLEGWE+E +   ARQTF EMVMDIGWDP NV AYDS+L  LL GPDG
Sbjct: 222  GLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDG 281

Query: 1781 MREVFKFFDTMKERRCYPGVKFLKVALQECVRKGDAKAAELLWGAMVERNGCRADTEMYN 1602
             RE  KFF+ M++R+C PG++F ++ LQECV+  D+K A+LLW  M+ RN CR DTEMYN
Sbjct: 282  RREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYN 341

Query: 1601 SMMALHCYVKETDLAIRLLDEMVYNGAFPDGQTYNVLLHFLVKERRLKEASPLLTEMIQN 1422
            SM+ALHC      +A  +LDEMV NGAFPD +TYNVL  FL++ R+L+EA  + +EM+QN
Sbjct: 342  SMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQN 401

Query: 1421 ECVPTHENCNSAIRVYVDCGDPYTAIKIWKCMLDSYDSDLDEAGNLLVVGLRDRKRIPEA 1242
            ECVP   NCN+A+R+Y+D GD Y AIK+WK +++++DS L+E GNLLV GLRD  RIPEA
Sbjct: 402  ECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEA 461

Query: 1241 VKYAEDMIDRGIKLNSSTLSKLKQALSKAGKEPVYDQLLRKWK 1113
            VKYA+DMI RGIKL SSTLSKLK AL + GK PVYD+LLRKWK
Sbjct: 462  VKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWK 504


>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  585 bits (1508), Expect = e-164
 Identities = 277/403 (68%), Positives = 332/403 (82%)
 Frame = -3

Query: 2321 YGFPGPSVKFFRWAGYQLNDKHSPYSWNLVVDLLGKNSLFDAMWDAIKSMKKEGLLSLAT 2142
            YGFPG +VKFFRW+G+QLND HSPYSWNLVVD+LGKN LFDAMWDA+KSMKK+GLLSLAT
Sbjct: 98   YGFPGSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLAT 157

Query: 2141 FASVFSSYVISDCVQEAIMTFEVMEQYGCPQDIVALNSLLSAICRDGKVVQAKDFLNIAK 1962
            FAS+FSSYVI+D V+EAIMTF+VMEQYGCP+DIVALNSLLSAICRDG+ VQA +FL   +
Sbjct: 158  FASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVR 217

Query: 1961 EKIRTDSDTYAILLEGWENEKDVAGARQTFTEMVMDIGWDPSNVPAYDSYLITLLKGPDG 1782
              IR D+DTYAILLEGWE+E +   ARQTF EMVMDIGWDP NV AYDS+L  LL GPDG
Sbjct: 218  GLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHGPDG 277

Query: 1781 MREVFKFFDTMKERRCYPGVKFLKVALQECVRKGDAKAAELLWGAMVERNGCRADTEMYN 1602
             RE  KFF+ M++R+C PG++F ++ LQECV+  D+K A+LLW  M+ RN CR DTEMYN
Sbjct: 278  RREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYN 337

Query: 1601 SMMALHCYVKETDLAIRLLDEMVYNGAFPDGQTYNVLLHFLVKERRLKEASPLLTEMIQN 1422
            SM+ALHC      +A  +LDEMV NGAFPD +TYNVL  FL++ R+L+EA  + +EM+QN
Sbjct: 338  SMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQN 397

Query: 1421 ECVPTHENCNSAIRVYVDCGDPYTAIKIWKCMLDSYDSDLDEAGNLLVVGLRDRKRIPEA 1242
            ECVP   NCN+A+R+Y+D GD Y AIK+WK +++++DS L+E GNLLV GLRD  RIPEA
Sbjct: 398  ECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRDHDRIPEA 457

Query: 1241 VKYAEDMIDRGIKLNSSTLSKLKQALSKAGKEPVYDQLLRKWK 1113
            VKYA+DMI RGIKL SSTLSKLK AL + GK PVYD+LLRKWK
Sbjct: 458  VKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWK 500


>ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|222843423|gb|EEE80970.1|
            predicted protein [Populus trichocarpa]
          Length = 499

 Score =  547 bits (1409), Expect = e-153
 Identities = 260/406 (64%), Positives = 327/406 (80%), Gaps = 1/406 (0%)
 Frame = -3

Query: 2321 YGFPGPSVKFFRWAGYQLNDKHSPYSWNLVVDLLGKNSLFDAMWDAIKSMKKEGLLSLAT 2142
            Y  PG +VKFFRWAG QLNDKHSPYSWNLVVDLLGKNS+FDAMW AIKSMK+E L+SLAT
Sbjct: 91   YSSPGSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRENLVSLAT 150

Query: 2141 FASVFSSYVISDCVQEAIMTFEVMEQYGCPQDIVALNSLLSAICRDGKVVQAKDFLNIAK 1962
            FASVFSSYVI D V+EAIMTFEVM+QYGC +++VALNSLLSAICR+G+   A +FL++AK
Sbjct: 151  FASVFSSYVIVDRVKEAIMTFEVMDQYGCTRNVVALNSLLSAICREGRTFDAVEFLHVAK 210

Query: 1961 EKIRTDSDTYAILLEGWENEKDVAGARQTFTEMVMDIGWDPSNVPAYDSYLITLLKGPDG 1782
             +I  D+D+YAILLEGWE E +VA AR TF +MV  +GWDP NVPAYD++L TLL G DG
Sbjct: 211  NRILPDADSYAILLEGWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMGYDG 270

Query: 1781 MREVFKFFDTMKERRCYPGVKFLKVALQECVRKGDAKAAELLWGAMVERNGCRADTEMYN 1602
            +RE  K FDTMK+R C+PGVKF ++AL+EC++  D +AA L+W  +V R G R D ++YN
Sbjct: 271  LREAMKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFRPDIQLYN 330

Query: 1601 SMMALHCYVKETDLAIRLLDEMVYNGAFPDGQTYNVLLHFLVKERRLKEASPLLTEMIQN 1422
             M+ +HCY  +TD+A + LDEM+YNG FPD QTYNVL  +L+K ++LKEAS +L EMI+N
Sbjct: 331  LMIGIHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIKN 390

Query: 1421 ECVPTHENCNSAIRVYVDCGDPYTAIKIWKCMLDSY-DSDLDEAGNLLVVGLRDRKRIPE 1245
            E  P   NCN+AI+ Y+D  +PY AIK+WKCM+++Y +SDL+EAGN+LVV LR    +PE
Sbjct: 391  EFFPNKTNCNAAIKAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVPE 450

Query: 1244 AVKYAEDMIDRGIKLNSSTLSKLKQALSKAGKEPVYDQLLRKWKLH 1107
            AVKYAE MI++GIKL SS+LSKLKQ L++  K  +Y++LLRKWK H
Sbjct: 451  AVKYAEVMIEKGIKLTSSSLSKLKQMLNEEKKPILYEELLRKWKAH 496


>ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527826|gb|EEF29924.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 510

 Score =  536 bits (1381), Expect = e-150
 Identities = 252/403 (62%), Positives = 314/403 (77%)
 Frame = -3

Query: 2321 YGFPGPSVKFFRWAGYQLNDKHSPYSWNLVVDLLGKNSLFDAMWDAIKSMKKEGLLSLAT 2142
            Y FPGP+VKFFRWAG++L D HSPYSWNLVVDLLGKN LFDAMWDAIKSMK + L+SLAT
Sbjct: 106  YSFPGPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKSKELVSLAT 165

Query: 2141 FASVFSSYVISDCVQEAIMTFEVMEQYGCPQDIVALNSLLSAICRDGKVVQAKDFLNIAK 1962
            FASVF SYV +  V++AI TFEVM QYG  +D+VALNSLLSAICRDGK V A DFL +AK
Sbjct: 166  FASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFLFVAK 225

Query: 1961 EKIRTDSDTYAILLEGWENEKDVAGARQTFTEMVMDIGWDPSNVPAYDSYLITLLKGPDG 1782
              I+ D+DT+AILLEGWE E ++  +RQTF EMV +IGWDP+N PAYD++L TLL G  G
Sbjct: 226  NSIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLMGRIG 285

Query: 1781 MREVFKFFDTMKERRCYPGVKFLKVALQECVRKGDAKAAELLWGAMVERNGCRADTEMYN 1602
              EV +F + MKE+RC PG++F + A++EC++  D + A L+W  M+E NG R D EMYN
Sbjct: 286  FNEVIEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFRPDIEMYN 345

Query: 1601 SMMALHCYVKETDLAIRLLDEMVYNGAFPDGQTYNVLLHFLVKERRLKEASPLLTEMIQN 1422
             M++L+CY   TD+A+R LDEMVYNG FPD QTYN+L  FL+K R+LKEAS L  EMI+N
Sbjct: 346  LMISLYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKN 405

Query: 1421 ECVPTHENCNSAIRVYVDCGDPYTAIKIWKCMLDSYDSDLDEAGNLLVVGLRDRKRIPEA 1242
            EC+P   NC++A+RV++   DPY AIK+WKCM+++Y+ DL+E GNLL+V L D    PEA
Sbjct: 406  ECLPNQANCSAAVRVFMHSKDPYMAIKVWKCMIENYELDLEETGNLLIVELCDLHMDPEA 465

Query: 1241 VKYAEDMIDRGIKLNSSTLSKLKQALSKAGKEPVYDQLLRKWK 1113
            VKYAE MI +GIK+ S T+ KLK  L +A KE VY++LLRKWK
Sbjct: 466  VKYAESMIGKGIKVTSPTMEKLKLCLKQARKEFVYERLLRKWK 508


>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
            mitochondrial-like [Glycine max]
          Length = 485

 Score =  535 bits (1377), Expect = e-149
 Identities = 249/405 (61%), Positives = 318/405 (78%)
 Frame = -3

Query: 2321 YGFPGPSVKFFRWAGYQLNDKHSPYSWNLVVDLLGKNSLFDAMWDAIKSMKKEGLLSLAT 2142
            YGFPG +VKFFRW+G  LND H+PYSWNLVVD+LGKN  FDAMWDAIKSM KEGLLSLAT
Sbjct: 81   YGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKEGLLSLAT 140

Query: 2141 FASVFSSYVISDCVQEAIMTFEVMEQYGCPQDIVALNSLLSAICRDGKVVQAKDFLNIAK 1962
            FASVFSSYV +D ++EAIM FE+M+ Y   +D+VALNSLLSAIC +G+ + A D+L +AK
Sbjct: 141  FASVFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSAICSNGRTLDACDYLQVAK 200

Query: 1961 EKIRTDSDTYAILLEGWENEKDVAGARQTFTEMVMDIGWDPSNVPAYDSYLITLLKGPDG 1782
            + +R D+DTYAIL+EGWE E  V GA++TF EMV++IGWDP NVPAYDS+L TL++GPDG
Sbjct: 201  KLVRPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPLNVPAYDSFLCTLVRGPDG 260

Query: 1781 MREVFKFFDTMKERRCYPGVKFLKVALQECVRKGDAKAAELLWGAMVERNGCRADTEMYN 1602
            + E  KF D+M++RRC+PGV+FLK AL ECV+  D + AE  W  +V     +   EMYN
Sbjct: 261  LLEAIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEFFWEVLVVGKVVQPTAEMYN 320

Query: 1601 SMMALHCYVKETDLAIRLLDEMVYNGAFPDGQTYNVLLHFLVKERRLKEASPLLTEMIQN 1422
             M+ L CY  +TD A R+LDEMVY GAFPD +TYN+L  FL+K R+L+EAS +  EM++N
Sbjct: 321  LMIGLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFLIKGRKLREASVVFAEMVKN 380

Query: 1421 ECVPTHENCNSAIRVYVDCGDPYTAIKIWKCMLDSYDSDLDEAGNLLVVGLRDRKRIPEA 1242
            ECVP  +NC++A++ YVDCG+P  AIK+WK ++++Y  DL+   N LVVGLRD  R+PEA
Sbjct: 381  ECVPEQDNCDAAVKAYVDCGEPVMAIKVWKYLVENYKKDLERTANFLVVGLRDLNRLPEA 440

Query: 1241 VKYAEDMIDRGIKLNSSTLSKLKQALSKAGKEPVYDQLLRKWKLH 1107
            VKYAEDMIDR I+L+S+T+SKL+Q+L K  +E VY+ LLRK K H
Sbjct: 441  VKYAEDMIDREIRLSSNTMSKLRQSLIKERREFVYEDLLRKSKSH 485


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