BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027486
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   161   6e-38
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   141   5e-32
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   139   3e-31
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   135   3e-30

>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  161 bits (407), Expect = 6e-38
 Identities = 74/131 (56%), Positives = 102/131 (77%)
 Frame = -1

Query: 393  DIAFKCGTKVEFRPALVPSTELQFSVEVWFAGEKIGEAIGQTRREAQRQAAEGSLMNLAD 214
            +I+ KCG KVEF+ +LV S +LQFSVE WFAGE++GE  G+TRREAQ  AAE S+ NLA+
Sbjct: 730  EISMKCGAKVEFKHSLVNSRDLQFSVEAWFAGERVGEGFGRTRREAQSVAAEASIKNLAN 789

Query: 213  KYISRLNPDSSSMHGDGNRFPNANENGFISDVNSFGYRPMPKEEFLTFSNAPEPSRVLDP 34
             YISR  PD+ ++HGD +++ +AN+NGF+  VNSFG +P+PK+E L++S++ E S +LDP
Sbjct: 790  IYISRAKPDNGALHGDASKYSSANDNGFLGHVNSFGSQPLPKDEILSYSDSSEQSGLLDP 849

Query: 33   RSDGSKKLMGS 1
            R + SKK M S
Sbjct: 850  RLESSKKSMSS 860


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/131 (56%), Positives = 98/131 (74%)
 Frame = -1

Query: 393  DIAFKCGTKVEFRPALVPSTELQFSVEVWFAGEKIGEAIGQTRREAQRQAAEGSLMNLAD 214
            +IA KCGTKVEFRPAL+ +++LQFS+E WF GEK+GE  G+TRREAQRQAAEGS+  LA 
Sbjct: 727  EIAMKCGTKVEFRPALIATSDLQFSIETWFVGEKVGEGTGKTRREAQRQAAEGSIKKLAG 786

Query: 213  KYISRLNPDSSSMHGDGNRFPNANENGFISDVNSFGYRPMPKEEFLTFSNAPEPSRVLDP 34
            K    ++    S +     +P+AN+NGF+ D+NSFG +P+ K+E +T+S   EPSR+LD 
Sbjct: 787  K----ISYHDISYYS----YPSANDNGFLGDMNSFGNQPLLKDENITYSATSEPSRLLDQ 838

Query: 33   RSDGSKKLMGS 1
            R +GSKK MGS
Sbjct: 839  RLEGSKKSMGS 849


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/131 (53%), Positives = 96/131 (73%)
 Frame = -1

Query: 393  DIAFKCGTKVEFRPALVPSTELQFSVEVWFAGEKIGEAIGQTRREAQRQAAEGSLMNLAD 214
            +IA KCGTKV+F  +LV STELQFS+E WF+G+KIG  +G+TR+EAQ +AAE S+ +LAD
Sbjct: 706  EIALKCGTKVDFISSLVASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLAD 765

Query: 213  KYISRLNPDSSSMHGDGNRFPNANENGFISDVNSFGYRPMPKEEFLTFSNAPEPSRVLDP 34
             Y+S    +  S +GD + FPN N++G++   +S G +P+ KE+  +FS A  PSRVLDP
Sbjct: 766  IYLSSAKDEPGSTYGDVSGFPNVNDSGYMGIASSLGNQPLSKEDSASFSTA-SPSRVLDP 824

Query: 33   RSDGSKKLMGS 1
            R D SK+ MGS
Sbjct: 825  RLDVSKRSMGS 835


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/131 (51%), Positives = 95/131 (72%)
 Frame = -1

Query: 393  DIAFKCGTKVEFRPALVPSTELQFSVEVWFAGEKIGEAIGQTRREAQRQAAEGSLMNLAD 214
            +IA KCGTKV+F  +LV STEL+FS+E WF+G+KIG   G+TR+EAQ +AA+ S+ +LAD
Sbjct: 712  EIALKCGTKVDFMSSLVASTELKFSLEAWFSGKKIGHGFGRTRKEAQNKAAKDSIEHLAD 771

Query: 213  KYISRLNPDSSSMHGDGNRFPNANENGFISDVNSFGYRPMPKEEFLTFSNAPEPSRVLDP 34
             Y+S    +  S +GD + FPN N+NG++   +S G +P+ KE+  +FS+A  PSR LDP
Sbjct: 772  IYLSSAKDEPGSTYGDVSGFPNVNDNGYMGIASSLGNQPLSKEDSASFSSA-SPSRALDP 830

Query: 33   RSDGSKKLMGS 1
            R D SK+ MGS
Sbjct: 831  RLDVSKRSMGS 841


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/127 (54%), Positives = 90/127 (70%)
 Frame = -1

Query: 393  DIAFKCGTKVEFRPALVPSTELQFSVEVWFAGEKIGEAIGQTRREAQRQAAEGSLMNLAD 214
            +IA KCGTKVEF  +LV ST LQFS+E WFAG+K+GE  G+TRREAQ +AAE S+  LAD
Sbjct: 710  EIALKCGTKVEFLSSLVASTALQFSIEAWFAGKKVGEGFGRTRREAQNKAAECSIKQLAD 769

Query: 213  KYISRLNPDSSSMHGDGNRFPNANENGFISDVNSFGYRPMPKEEFLTFSNAPEPSRVLDP 34
             Y+S    DS S +GD + F  +N NGF+S  NS G + +PKE  ++FS + + SRV DP
Sbjct: 770  IYMSHAKDDSGSTYGDVSGFHGSNNNGFVSSGNSLGNQLLPKES-VSFSTSSDSSRVSDP 828

Query: 33   RSDGSKK 13
            R + SK+
Sbjct: 829  RLEVSKR 835