BLASTX nr result

ID: Panax21_contig00027435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027435
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]       75   1e-11
ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2...    73   5e-11
gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK...    73   5e-11
ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855...    65   1e-08

>gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 48/117 (41%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
 Frame = -3

Query: 621 GWNTISPHEYHAHASGTQRMPGVVTADLPPYQNVLMTFNNKITYEDEAPHVMNRXXXXXX 442
           G NT S  +YH + S   +MP ++    P Y +V   FNNK+T E+E      +      
Sbjct: 14  GSNTTSG-DYHDYISRLSKMPSIIHG-APQYPSVHKAFNNKVTQEEEVNEA-RQDNVNKK 70

Query: 441 XXXXXHKKVHFVEQEKFVDHK-NGKFVVHEESIDAEADGFIMQKHKKFELAKWETFK 274
                 KKV   EQ + +D   N K    EE +DAEADGFI QK K FEL KW+TFK
Sbjct: 71  NPTRSTKKVRVKEQVQVIDQNGNRKSEDIEEDVDAEADGFIKQKQKGFELCKWKTFK 127


>ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/130 (37%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = -3

Query: 660 LDENYVNYQPYNHGWNTISPHEYHAHASGTQRMPGVVTADLPPYQNVLMTFNNKITYEDE 481
           + +  V+     HGW+T S  +YHA+ S   RMP V+    P Y +V   FNNK     +
Sbjct: 1   MSKGTVHQTRQQHGWDTTSD-DYHAYISKLSRMPSVLHG-APQYPSVRKAFNNKRN-PTK 57

Query: 480 APHVMNRXXXXXXXXXXXHKKVHFVEQEKFVDHK-NGKFVVHEESIDAEADGFIMQKHKK 304
           +P                 KKV   EQ + ++   N K  V EE++D EA+GFI QKHK 
Sbjct: 58  SP-----------------KKVQVTEQVQIIEQNGNQKSEVIEETVDHEAEGFIQQKHKG 100

Query: 303 FELAKWETFK 274
            EL KW+TFK
Sbjct: 101 LELCKWKTFK 110


>ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 621 GWNTISPHEYHAHASGTQRMPGVVTADLPPYQNVLMTFNNKITYEDEAPHVMNRXXXXXX 442
           G NT S  +YH + S   +MP ++    P Y +V   FNNK+T E+E      +      
Sbjct: 45  GSNTTSG-DYHDYISRLSKMPSIIHG-APQYPSVHKAFNNKVTQEEEVNEA-RQDNVNKK 101

Query: 441 XXXXXHKKVHFVEQEKFVDHK-NGKFVVHEESIDAEADGFIMQKHKKFELAKWETFK 274
                 KKV   EQ + +D   N K    EE +D EADGFI QK K FEL KW+TFK
Sbjct: 102 NPARSTKKVRVKEQVQVIDQNGNRKSEDIEEDVDDEADGFIKQKQKGFELCKWKTFK 158


>gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK96149.1| unknown
           [Populus trichocarpa]
          Length = 129

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 47/117 (40%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 621 GWNTISPHEYHAHASGTQRMPGVVTADLPPYQNVLMTFNNKITYEDEAPHVMNRXXXXXX 442
           G NT S  +YH + S   +MP ++    P Y +V   FNNK+T E+E      +      
Sbjct: 14  GSNTTSG-DYHDYISRLSKMPSIIHG-APQYPSVHKAFNNKVTQEEEVNEA-RQDNVNKK 70

Query: 441 XXXXXHKKVHFVEQEKFVDHK-NGKFVVHEESIDAEADGFIMQKHKKFELAKWETFK 274
                 KKV   EQ + +D   N K    EE +D EADGFI QK K FEL KW+TFK
Sbjct: 71  NPARSTKKVRVKEQVQVIDQNGNRKSEDIEEDVDDEADGFIKQKQKGFELCKWKTFK 127


>ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855230 [Vitis vinifera]
          Length = 162

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = -3

Query: 624 HGWNTISPHEYHAHASGTQRMPGVVTADLPPYQNVLMTFNNKITYEDEAPHVMNRXXXXX 445
           HGW+T +P +Y +H    +R   +V    P Y  V   FNNK  +E+   +   +     
Sbjct: 54  HGWDT-TPDDYLSHIKRMERSLSIVPG-APHYPVVHKAFNNKSPFEEAQGNGRKQRQP-- 109

Query: 444 XXXXXXHKKVHFVEQEKFVDHKNGKFVVHE-ESIDAEADGFIMQKHKKFELAKWETFK 274
                  +KV F +Q+   ++ + + V  E + I+AEA+GFI QKH+ FEL KW+TFK
Sbjct: 110 -------RKVSFQDQQGQSNNGSSQVVDEETDDIEAEAEGFIQQKHRGFELCKWKTFK 160


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