BLASTX nr result

ID: Panax21_contig00027429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027429
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vi...   162   5e-38
ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]...   147   1e-33
ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|NP_001154597.1| armadillo/beta-catenin-like repeat-containin...   141   7e-32
dbj|BAF00236.1| hypothetical protein [Arabidopsis thaliana]           141   7e-32

>ref|XP_002269769.1| PREDICTED: importin subunit beta-1 [Vitis vinifera]
            gi|297735635|emb|CBI18129.3| unnamed protein product
            [Vitis vinifera]
          Length = 872

 Score =  162 bits (409), Expect = 5e-38
 Identities = 82/111 (73%), Positives = 90/111 (81%)
 Frame = -3

Query: 580  EYANQLRRSIFEAYSGILQGFKNSKADLMLPHAPHLLQFIELVSKDRSRDESVTKXXXXX 401
            EY NQLRRSIFEAYSGILQGFKNSK +LMLPHA  LLQFIELVS+DR R+ESVTK     
Sbjct: 759  EYGNQLRRSIFEAYSGILQGFKNSKPELMLPHAEKLLQFIELVSRDRHREESVTKAAVAV 818

Query: 400  XXXXXXXXGSNVKMLFKDRSFCIELLGECLESDDEQLKETATWTQGMLTRV 248
                    GSN+K+LFKDR+FC + LGECLESDDEQLKETATWTQGM+ RV
Sbjct: 819  MGDLADTLGSNMKILFKDRTFCADFLGECLESDDEQLKETATWTQGMIGRV 869


>ref|XP_002526656.1| importin beta-1, putative [Ricinus communis]
            gi|223533956|gb|EEF35678.1| importin beta-1, putative
            [Ricinus communis]
          Length = 872

 Score =  147 bits (371), Expect = 1e-33
 Identities = 74/111 (66%), Positives = 85/111 (76%)
 Frame = -3

Query: 580  EYANQLRRSIFEAYSGILQGFKNSKADLMLPHAPHLLQFIELVSKDRSRDESVTKXXXXX 401
            +Y NQL+RSIFEAYSGILQGFKNSK ++MLPHA HLLQFIE+V +D  RDESVTK     
Sbjct: 759  DYGNQLKRSIFEAYSGILQGFKNSKPEVMLPHAGHLLQFIEMVFRDSQRDESVTKAAVAV 818

Query: 400  XXXXXXXXGSNVKMLFKDRSFCIELLGECLESDDEQLKETATWTQGMLTRV 248
                    GSN K+LFKD++F  E LGECL+SDDEQLKETA WTQ M+ RV
Sbjct: 819  MGDLADALGSNTKILFKDKTFYSEFLGECLQSDDEQLKETANWTQVMIARV 869


>ref|XP_002309153.1| predicted protein [Populus trichocarpa] gi|222855129|gb|EEE92676.1|
            predicted protein [Populus trichocarpa]
          Length = 870

 Score =  144 bits (363), Expect = 1e-32
 Identities = 70/111 (63%), Positives = 85/111 (76%)
 Frame = -3

Query: 580  EYANQLRRSIFEAYSGILQGFKNSKADLMLPHAPHLLQFIELVSKDRSRDESVTKXXXXX 401
            +Y NQL+RSIFEAYSGILQGFK+SK +LMLPHA HL QFIELV +++ RDESVTK     
Sbjct: 758  DYGNQLKRSIFEAYSGILQGFKDSKPELMLPHAGHLFQFIELVFREKYRDESVTKAAVAV 817

Query: 400  XXXXXXXXGSNVKMLFKDRSFCIELLGECLESDDEQLKETATWTQGMLTRV 248
                    G N K+LFKD++FC++ LGECL+S+DE LKETA WTQ M+ RV
Sbjct: 818  MGDLADALGPNTKILFKDKAFCVQFLGECLQSEDEHLKETANWTQVMIARV 868


>ref|NP_001154597.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|332641178|gb|AEE74699.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 871

 Score =  141 bits (356), Expect = 7e-32
 Identities = 71/111 (63%), Positives = 84/111 (75%)
 Frame = -3

Query: 580  EYANQLRRSIFEAYSGILQGFKNSKADLMLPHAPHLLQFIELVSKDRSRDESVTKXXXXX 401
            +YANQLRRSIFEAYSGILQGFK++KA+LM+P+A HLLQF+ELVSKD  RDESVTK     
Sbjct: 759  DYANQLRRSIFEAYSGILQGFKDAKAELMMPYAQHLLQFVELVSKDSLRDESVTKAAVAA 818

Query: 400  XXXXXXXXGSNVKMLFKDRSFCIELLGECLESDDEQLKETATWTQGMLTRV 248
                    G N K LF++ +FC E L ECLES+DE LK TA WTQGM+ R+
Sbjct: 819  MGDLADVVGENTKQLFQNFTFCDEFLNECLESEDEDLKVTARWTQGMIARL 869


>dbj|BAF00236.1| hypothetical protein [Arabidopsis thaliana]
          Length = 317

 Score =  141 bits (356), Expect = 7e-32
 Identities = 71/111 (63%), Positives = 84/111 (75%)
 Frame = -3

Query: 580 EYANQLRRSIFEAYSGILQGFKNSKADLMLPHAPHLLQFIELVSKDRSRDESVTKXXXXX 401
           +YANQLRRSIFEAYSGILQGFK++KA+LM+P+A HLLQF+ELVSKD  RDESVTK     
Sbjct: 205 DYANQLRRSIFEAYSGILQGFKDAKAELMMPYAQHLLQFVELVSKDSLRDESVTKAAVAA 264

Query: 400 XXXXXXXXGSNVKMLFKDRSFCIELLGECLESDDEQLKETATWTQGMLTRV 248
                   G N K LF++ +FC E L ECLES+DE LK TA WTQGM+ R+
Sbjct: 265 MGDLADVVGENTKQLFQNFTFCDEFLNECLESEDEDLKVTARWTQGMIARL 315


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