BLASTX nr result

ID: Panax21_contig00027423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027423
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB96657.1| SecY homolog [Zea mays]                                120   9e-26
ref|XP_002262945.2| PREDICTED: preprotein translocase subunit se...   119   2e-25
emb|CBI24093.3| unnamed protein product [Vitis vinifera]              119   2e-25
sp|O63066.1|SECY_MAIZE RecName: Full=Preprotein translocase subu...   119   3e-25
gb|AFW56837.1| chloroplast SecY-1 [Zea mays]                          119   3e-25

>gb|AAB96657.1| SecY homolog [Zea mays]
          Length = 343

 Score =  120 bits (302), Expect = 9e-26
 Identities = 71/119 (59%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
 Frame = +2

Query: 2   IGQVLYLCPYVNDFSTQWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISY 181
           I QVLYL PYVNDFST+W                +IGERISDLKLGNGTSLLIFTSIISY
Sbjct: 204 IVQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISY 263

Query: 182 LPASFGRTAAQAFQDGNYAGXXXXXXXXXXXXXXXXYVQIF--VNNVLNKGSQEAERKI 352
           LPASFGRT AQAFQDGNY G                YVQIF  V        QEAERKI
Sbjct: 264 LPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYVQIFFRVLTAWVFRFQEAERKI 322


>ref|XP_002262945.2| PREDICTED: preprotein translocase subunit secY, chloroplastic-like
           [Vitis vinifera]
          Length = 546

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/117 (58%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   IGQVLYLCPYVNDFSTQWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISY 181
           IGQVL+L PYVNDFSTQW                YIGERISDLKLGNGTSLLIFTSIISY
Sbjct: 246 IGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIISY 305

Query: 182 LPASFGRTAAQAFQDGNYAGXXXXXXXXXXXXXXXXYVQIFVNNVLNKGSQEAERKI 352
           LPASFGRT AQAFQDGNY G                YV            QEAERKI
Sbjct: 306 LPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYV------------QEAERKI 350


>emb|CBI24093.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  119 bits (299), Expect = 2e-25
 Identities = 69/117 (58%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   IGQVLYLCPYVNDFSTQWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISY 181
           IGQVL+L PYVNDFSTQW                YIGERISDLKLGNGTSLLIFTSIISY
Sbjct: 277 IGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFTSIISY 336

Query: 182 LPASFGRTAAQAFQDGNYAGXXXXXXXXXXXXXXXXYVQIFVNNVLNKGSQEAERKI 352
           LPASFGRT AQAFQDGNY G                YV            QEAERKI
Sbjct: 337 LPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYV------------QEAERKI 381


>sp|O63066.1|SECY_MAIZE RecName: Full=Preprotein translocase subunit SECY, chloroplastic;
           AltName: Full=CpSecY; Flags: Precursor
           gi|2934902|gb|AAC05019.1| cpSecY [Zea mays]
          Length = 553

 Score =  119 bits (297), Expect = 3e-25
 Identities = 68/117 (58%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   IGQVLYLCPYVNDFSTQWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISY 181
           IGQVLYL PYVNDFST+W                +IGERISDLKLGNGTSLLIFTSIISY
Sbjct: 253 IGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISY 312

Query: 182 LPASFGRTAAQAFQDGNYAGXXXXXXXXXXXXXXXXYVQIFVNNVLNKGSQEAERKI 352
           LPASFGRT AQAFQDGNY G                YV            QEAERKI
Sbjct: 313 LPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYV------------QEAERKI 357


>gb|AFW56837.1| chloroplast SecY-1 [Zea mays]
          Length = 553

 Score =  119 bits (297), Expect = 3e-25
 Identities = 68/117 (58%), Positives = 70/117 (59%)
 Frame = +2

Query: 2   IGQVLYLCPYVNDFSTQWXXXXXXXXXXXXXXXXYIGERISDLKLGNGTSLLIFTSIISY 181
           IGQVLYL PYVNDFST+W                +IGERISDLKLGNGTSLLIFTSIISY
Sbjct: 253 IGQVLYLRPYVNDFSTEWVLTSVTLLTLGSVFTTFIGERISDLKLGNGTSLLIFTSIISY 312

Query: 182 LPASFGRTAAQAFQDGNYAGXXXXXXXXXXXXXXXXYVQIFVNNVLNKGSQEAERKI 352
           LPASFGRT AQAFQDGNY G                YV            QEAERKI
Sbjct: 313 LPASFGRTVAQAFQDGNYVGLLTIILSFLLLVLGIVYV------------QEAERKI 357


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