BLASTX nr result

ID: Panax21_contig00027422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027422
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547235.1| PREDICTED: uncharacterized protein LOC100782...   274   6e-72
ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812...   272   2e-71
ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago ...   263   1e-68
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   263   1e-68
ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II tra...   261   4e-68

>ref|XP_003547235.1| PREDICTED: uncharacterized protein LOC100782680 [Glycine max]
          Length = 1310

 Score =  274 bits (700), Expect = 6e-72
 Identities = 139/175 (79%), Positives = 150/175 (85%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3    VRDIVCNGLCRKRLEKLKKAKNGMKYGQVSLATAMTKVKLAASLGASLAWF-GGLALVQS 179
            VR+IVC+GL R+RLEKLK  K+G+KYGQ SLA +MT+VKLAA+LGASL W  GGL LVQ 
Sbjct: 1098 VREIVCSGLPRERLEKLKATKDGIKYGQASLAASMTRVKLAAALGASLVWISGGLMLVQL 1157

Query: 180  VIKETLPSWFISVHRSQHEEDSGGAVAMLCGYALAYFALLCGAFAWGVDSSSSTSKRRPK 359
            +IKETLPSWFISVHR   EE SGG VAML GYALAYFA+LCGAFAWGVDSSS+ SKRRPK
Sbjct: 1158 LIKETLPSWFISVHRLDQEEKSGGMVAMLGGYALAYFAVLCGAFAWGVDSSSAASKRRPK 1217

Query: 360  VLGYHMEFLASALDGKTSLGCDPATWHAYVSGLVSLMVKCTPTWVLEVDVEVLKR 524
            VLG HMEFLASALDGK SLGCD ATW AYVSG VSLMV CTP WVLEVDV VLKR
Sbjct: 1218 VLGTHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKR 1272


>ref|XP_003542894.1| PREDICTED: uncharacterized protein LOC100812937 [Glycine max]
          Length = 1305

 Score =  272 bits (695), Expect = 2e-71
 Identities = 140/175 (80%), Positives = 149/175 (85%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3    VRDIVCNGLCRKRLEKLKKAKNGMKYGQVSLATAMTKVKLAASLGASLAWF-GGLALVQS 179
            VR+IVC+GL R RLEKLK  K+G+KYGQVSLA +MT+VKLAA+LGASL W  GGL LVQ 
Sbjct: 1093 VREIVCSGLPRDRLEKLKANKDGIKYGQVSLAASMTRVKLAAALGASLVWISGGLMLVQL 1152

Query: 180  VIKETLPSWFISVHRSQHEEDSGGAVAMLCGYALAYFALLCGAFAWGVDSSSSTSKRRPK 359
            +IKETLPSWFISV R   EE SGG VAML GYALAYFA+LCGAFAWGVDSSSS SKRRPK
Sbjct: 1153 LIKETLPSWFISVQRLDQEEKSGGMVAMLGGYALAYFAVLCGAFAWGVDSSSSASKRRPK 1212

Query: 360  VLGYHMEFLASALDGKTSLGCDPATWHAYVSGLVSLMVKCTPTWVLEVDVEVLKR 524
            VLG HMEFLASALDGK SLGCD ATW AYVSG VSLMV CTP WVLEVDV VLKR
Sbjct: 1213 VLGTHMEFLASALDGKISLGCDSATWRAYVSGFVSLMVGCTPNWVLEVDVHVLKR 1267


>ref|XP_003594102.1| hypothetical protein MTR_2g021400 [Medicago truncatula]
            gi|355483150|gb|AES64353.1| hypothetical protein
            MTR_2g021400 [Medicago truncatula]
          Length = 770

 Score =  263 bits (672), Expect = 1e-68
 Identities = 134/175 (76%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3    VRDIVCNGLCRKRLEKLKKAKNGMKYGQVSLATAMTKVKLAASLGASLAWF-GGLALVQS 179
            VR+IVC  L ++RL+KLK  K+G+KYGQVS+A +MT+VKLAA+LGASL W  GGL LVQ 
Sbjct: 558  VREIVCGVLPKQRLKKLKLTKDGIKYGQVSVAASMTRVKLAAALGASLVWISGGLTLVQL 617

Query: 180  VIKETLPSWFISVHRSQHEEDSGGAVAMLCGYALAYFALLCGAFAWGVDSSSSTSKRRPK 359
            +I ETLPSWFISV RS  EE S G VAML GY LAYFA+LCGAFAWGVDSSSS SKRRPK
Sbjct: 618  LINETLPSWFISVQRSDQEEKSNGMVAMLGGYGLAYFAVLCGAFAWGVDSSSSASKRRPK 677

Query: 360  VLGYHMEFLASALDGKTSLGCDPATWHAYVSGLVSLMVKCTPTWVLEVDVEVLKR 524
            VLG HMEFLASALDGK SLGCDPATW AYVSG VSLMV C P WVLEVDV VLKR
Sbjct: 678  VLGTHMEFLASALDGKISLGCDPATWRAYVSGFVSLMVGCIPNWVLEVDVNVLKR 732


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
            gi|297736973|emb|CBI26174.3| unnamed protein product
            [Vitis vinifera]
          Length = 1305

 Score =  263 bits (671), Expect = 1e-68
 Identities = 134/175 (76%), Positives = 144/175 (82%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3    VRDIVCNGLCRKRLEKLKKAKNGMKYGQVSLATAMTKVKLAASLGASLAWF-GGLALVQS 179
            VR+I  + L  +R EKLKKAKN MKYGQ+SL  A+ +VKL ASL ASL W  GGL LVQS
Sbjct: 1093 VREIASSQLSGERSEKLKKAKNEMKYGQISLGAALARVKLIASLAASLVWLSGGLGLVQS 1152

Query: 180  VIKETLPSWFISVHRSQHEEDSGGAVAMLCGYALAYFALLCGAFAWGVDSSSSTSKRRPK 359
            +IKETLPSWFISVHRS+ EE SGG VAML GYALAYF +LCGAF WGVDSSSS SKRRPK
Sbjct: 1153 LIKETLPSWFISVHRSEQEEGSGGMVAMLGGYALAYFTVLCGAFVWGVDSSSSASKRRPK 1212

Query: 360  VLGYHMEFLASALDGKTSLGCDPATWHAYVSGLVSLMVKCTPTWVLEVDVEVLKR 524
            +LG HMEFLASALDG  SLGCD ATW AYVSG VSLMV CTPTWVLEVDV VLKR
Sbjct: 1213 ILGSHMEFLASALDGNISLGCDCATWRAYVSGFVSLMVGCTPTWVLEVDVNVLKR 1267


>ref|XP_004165440.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            33A-like [Cucumis sativus]
          Length = 1311

 Score =  261 bits (667), Expect = 4e-68
 Identities = 131/175 (74%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
 Frame = +3

Query: 3    VRDIVCNGLCRKRLEKLKKAKNGMKYGQVSLATAMTKVKLAASLGASLAWF-GGLALVQS 179
            VR+I CNG  + +  KLK   N  +YGQ+SL++AMT+VKLAASLGASL W  GGL LVQS
Sbjct: 1099 VREIACNGAGKDKSGKLKTTNNAKRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQS 1158

Query: 180  VIKETLPSWFISVHRSQHEEDSGGAVAMLCGYALAYFALLCGAFAWGVDSSSSTSKRRPK 359
            VIKETLPSWFISVHRS+ E+ S G V+ML GYALAYFA+LCGAFAWG DSSSS SKRRPK
Sbjct: 1159 VIKETLPSWFISVHRSEQEKCSEGIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPK 1218

Query: 360  VLGYHMEFLASALDGKTSLGCDPATWHAYVSGLVSLMVKCTPTWVLEVDVEVLKR 524
            +LG HMEFLASALDGK SLGCD ATW AYV+G VSLMV CTP+WVL+VDVEVLKR
Sbjct: 1219 ILGVHMEFLASALDGKISLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKR 1273


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