BLASTX nr result

ID: Panax21_contig00027382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027382
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262...    88   8e-16
emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]    87   1e-15
ref|XP_002521884.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002311561.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002281928.1| PREDICTED: uncharacterized protein LOC100262842 [Vitis vinifera]
           gi|296081414|emb|CBI16847.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = -2

Query: 447 DGCIDQETS-VGYHPSLFKKPRLPMGESDFHDQSIFMSPIPPTKRARIETMSCISDQNLQ 271
           DGC+D+ET  VG+HP        P+   +  D     SP+   KRARIETMS IS+ NLQ
Sbjct: 96  DGCVDEETGDVGFHP--------PLKSIEESDSQFIYSPLR-AKRARIETMSSISE-NLQ 145

Query: 270 CSQRICEIGTINPYCFDDYMLDYEKSXXXXXXXXXXXXGFRIQAASMPTITAFSLPHDVF 91
           CSQRICE     PY FDDY+ +                 ++ QA S     AF LPHD++
Sbjct: 146 CSQRICET-VATPYSFDDYLAE------KRGIKEGGGFRWQTQAPS----PAFPLPHDLY 194

Query: 90  HKLDPFAHANAVPEESDFPKVSEQEDK 10
           + L+PF +A    EESDF K+++ ED+
Sbjct: 195 N-LNPFGYA---AEESDFLKIAKLEDQ 217


>emb|CAN63286.1| hypothetical protein VITISV_025194 [Vitis vinifera]
          Length = 303

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
 Frame = -2

Query: 447 DGCIDQETS-VGYHPSLFKKPRLPMGESDFHDQSIFMSPIPPTKRARIETMSCISDQNLQ 271
           DGC+D+ET  VG+HP        P+   +  D     SP+   KRARIETMS IS+ NLQ
Sbjct: 96  DGCVDEETGDVGFHP--------PLKSIEESDSXFIYSPLR-AKRARIETMSSISE-NLQ 145

Query: 270 CSQRICEIGTINPYCFDDYMLDYEKSXXXXXXXXXXXXGFRIQAASMPTITAFSLPHDVF 91
           CSQRICE     PY FDDY+ +                 ++ QA S     AF LPHD++
Sbjct: 146 CSQRICET-VATPYSFDDYLAE------KRGIKEGGGFRWQTQAPS----PAFPLPHDLY 194

Query: 90  HKLDPFAHANAVPEESDFPKVSEQEDK 10
           + L+PF +A    EESDF K+++ ED+
Sbjct: 195 N-LNPFGYA---AEESDFLKIAKLEDQ 217


>ref|XP_002521884.1| conserved hypothetical protein [Ricinus communis]
           gi|223538922|gb|EEF40520.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 56/126 (44%), Positives = 69/126 (54%)
 Frame = -2

Query: 381 PMGESDFHDQSIFMSPIPPTKRARIETMSCISDQNLQCSQRICEIGTINPYCFDDYMLDY 202
           P+ ESD H    F+    P+KRARIET S ISD NLQCSQ ICE  T NPY  DDYM   
Sbjct: 104 PLAESDSH----FIYSTVPSKRARIETKSSISDTNLQCSQGICEAVT-NPYALDDYMGIK 158

Query: 201 EKSXXXXXXXXXXXXGFRIQAASMPTITAFSLPHDVFHKLDPFAHANAVPEESDFPKVSE 22
           E +                Q  S P  T FSLPHD+ + L+ F +A    EESDF K+ +
Sbjct: 159 EGNGGGFRWE---------QTHSKPQFTPFSLPHDLCN-LNSFKYA---VEESDFLKIPK 205

Query: 21  QEDKTC 4
            + ++C
Sbjct: 206 VKYESC 211


>ref|XP_002315831.1| predicted protein [Populus trichocarpa] gi|222864871|gb|EEF02002.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 49/115 (42%), Positives = 58/115 (50%)
 Frame = -2

Query: 372 ESDFHDQSIFMSPIPPTKRARIETMSCISDQNLQCSQRICEIGTINPYCFDDYMLDYEKS 193
           ESD H     +S    +KRARIET S +S++ LQCSQ ICE    NPY FDDY    E+ 
Sbjct: 108 ESDSHSMYRPLS----SKRARIETRSSLSEEFLQCSQGICET-ISNPYSFDDYAGIKEEV 162

Query: 192 XXXXXXXXXXXXGFRIQAASMPTITAFSLPHDVFHKLDPFAHANAVPEESDFPKV 28
                           Q  S P  TAFSLPHD+++    F       EESDF KV
Sbjct: 163 NGVGFKWE--------QTHSNPQCTAFSLPHDLYN----FNPLKREVEESDFLKV 205


>ref|XP_002311561.1| predicted protein [Populus trichocarpa] gi|222851381|gb|EEE88928.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/99 (42%), Positives = 50/99 (50%)
 Frame = -2

Query: 324 TKRARIETMSCISDQNLQCSQRICEIGTINPYCFDDYMLDYEKSXXXXXXXXXXXXGFRI 145
           +KRARIET S IS++NLQCSQ I E    NPY FDDYM   E+                 
Sbjct: 7   SKRARIETRSSISEENLQCSQGIWET-VSNPYSFDDYMGIMEEGNGGGFKWE-------- 57

Query: 144 QAASMPTITAFSLPHDVFHKLDPFAHANAVPEESDFPKV 28
           QA S P  TAFS   D+++       +    EESD  KV
Sbjct: 58  QAHSKPQSTAFSPSLDLYY----LNTSKREAEESDLVKV 92


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