BLASTX nr result
ID: Panax21_contig00027377
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00027377 (406 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera] 67 2e-19 ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera] 67 2e-19 gb|ABK94071.1| unknown [Populus trichocarpa] 49 1e-11 ref|XP_002311299.1| predicted protein [Populus trichocarpa] gi|2... 49 2e-11 ref|XP_002315065.1| predicted protein [Populus trichocarpa] gi|1... 50 7e-10 >emb|CAN78200.1| hypothetical protein VITISV_016086 [Vitis vinifera] Length = 542 Score = 66.6 bits (161), Expect(2) = 2e-19 Identities = 42/82 (51%), Positives = 51/82 (62%) Frame = -1 Query: 247 RHRRRLIKFVLHLLEIPADSGIPAPDKLRKASDSLVDWEKNSRGLSKRKKGFEIRDQEVL 68 R RR LI FV+HLL+ + PAP+KL+KA DSL DW RG +KR+ FE D +VL Sbjct: 110 RQRRLLINFVIHLLDFSGEG--PAPEKLKKARDSLADWANCPRGFTKRR--FE-NDVKVL 164 Query: 67 IRDLVAAIVRIEPRGKRSSVGR 2 I DL + PRGK SSV R Sbjct: 165 IHDLARGLGN-APRGKISSVER 185 Score = 53.9 bits (128), Expect(2) = 2e-19 Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%) Frame = -2 Query: 390 PNDFDLISRSFDETILQRLKTLTISG*SPPSISFYWIRLAVNFLSSTHAIV-AVSSNL 220 PN+F+L+S SFD+ +++RLK L +PPS++ W+ LAV+FLS+ HA V ++ SNL Sbjct: 24 PNNFELLSCSFDDALIRRLKAL-----NPPSLTLSWLSLAVDFLSTIHAEVRSLISNL 76 >ref|XP_002273185.1| PREDICTED: UPF0496 protein 4 [Vitis vinifera] Length = 337 Score = 66.6 bits (161), Expect(2) = 2e-19 Identities = 42/82 (51%), Positives = 51/82 (62%) Frame = -1 Query: 247 RHRRRLIKFVLHLLEIPADSGIPAPDKLRKASDSLVDWEKNSRGLSKRKKGFEIRDQEVL 68 R RR LI FV+HLL+ + PAP+KL+KA DSL DW RG +KR+ FE D +VL Sbjct: 110 RQRRLLINFVIHLLDFSGEG--PAPEKLKKARDSLADWANCPRGFTKRR--FE-NDVKVL 164 Query: 67 IRDLVAAIVRIEPRGKRSSVGR 2 I DL + PRGK SSV R Sbjct: 165 IHDLARGLGN-APRGKISSVER 185 Score = 53.9 bits (128), Expect(2) = 2e-19 Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%) Frame = -2 Query: 390 PNDFDLISRSFDETILQRLKTLTISG*SPPSISFYWIRLAVNFLSSTHAIV-AVSSNL 220 PN+F+L+S SFD+ +++RLK L +PPS++ W+ LAV+FLS+ HA V ++ SNL Sbjct: 24 PNNFELLSCSFDDALIRRLKAL-----NPPSLTLSWLSLAVDFLSTIHAEVRSLISNL 76 >gb|ABK94071.1| unknown [Populus trichocarpa] Length = 335 Score = 48.5 bits (114), Expect(2) = 1e-11 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -1 Query: 247 RHRRRLIKFVLHLLEIPADSGIPAPDKLRKASDSLVDWEKNSRGLSKRKKGFEIRDQEVL 68 RHRR L+KF LHL +++ +KLR+A SL DW+ N +G + + ++ E L Sbjct: 111 RHRRLLLKFALHLFNNNSNNNSEDAEKLRRARASLTDWDNNLKGY----RYYSSKNLEHL 166 Query: 67 IRDLVAAIVRIEPRGKRSS 11 + DL A +++ PR K SS Sbjct: 167 VIDL-ALMLKEVPRCKISS 184 Score = 45.8 bits (107), Expect(2) = 1e-11 Identities = 26/52 (50%), Positives = 35/52 (67%) Frame = -2 Query: 402 KRCAPNDFDLISRSFDETILQRLKTLTISG*SPPSISFYWIRLAVNFLSSTH 247 K+ +FDLIS+SFDE+IL+RL TL S S +I+ W+ A+ FLS TH Sbjct: 20 KKKKKKEFDLISQSFDESILRRLNTLCNSH-SSVTINLSWLSSALAFLSFTH 70 >ref|XP_002311299.1| predicted protein [Populus trichocarpa] gi|222851119|gb|EEE88666.1| predicted protein [Populus trichocarpa] Length = 334 Score = 48.5 bits (114), Expect(2) = 2e-11 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -1 Query: 247 RHRRRLIKFVLHLLEIPADSGIPAPDKLRKASDSLVDWEKNSRGLSKRKKGFEIRDQEVL 68 RHRR L+KF LHL +++ +KLR+A SL DW+ N +G + + ++ E L Sbjct: 110 RHRRLLLKFALHLFNNNSNNNSEDAEKLRRARASLTDWDNNLKGY----RYYSSKNLEHL 165 Query: 67 IRDLVAAIVRIEPRGKRSS 11 + DL A +++ PR K SS Sbjct: 166 VIDL-ALMLKEVPRCKISS 183 Score = 45.1 bits (105), Expect(2) = 2e-11 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = -2 Query: 384 DFDLISRSFDETILQRLKTLTISG*SPPSISFYWIRLAVNFLSSTH 247 +FDLIS+SFDE+IL+RL TL S S +I+ W+ A+ FLS TH Sbjct: 25 EFDLISQSFDESILRRLNTLCNSH-SSVTINLSWLSSALAFLSFTH 69 >ref|XP_002315065.1| predicted protein [Populus trichocarpa] gi|118486705|gb|ABK95189.1| unknown [Populus trichocarpa] gi|222864105|gb|EEF01236.1| predicted protein [Populus trichocarpa] Length = 363 Score = 50.1 bits (118), Expect(2) = 7e-10 Identities = 30/55 (54%), Positives = 37/55 (67%), Gaps = 3/55 (5%) Frame = -2 Query: 402 KRCAPNDFDLISRSFDETILQRLKTLT-ISG*SPPS--ISFYWIRLAVNFLSSTH 247 K A FDL S SFDE++L+RLKTLT S SPPS I+ W+ A++FLS TH Sbjct: 25 KDAAHMKFDLFSHSFDESLLRRLKTLTNSSSSSPPSVAINLSWLSSALDFLSYTH 79 Score = 38.1 bits (87), Expect(2) = 7e-10 Identities = 28/79 (35%), Positives = 40/79 (50%) Frame = -1 Query: 247 RHRRRLIKFVLHLLEIPADSGIPAPDKLRKASDSLVDWEKNSRGLSKRKKGFEIRDQEVL 68 RHRR ++ F LH+L ++G +KL +A SL DW N +G + E L Sbjct: 120 RHRRLVLSFALHVL----NNGSEDQEKLTRARVSLSDWVNNYKGPIFDSN----NNLENL 171 Query: 67 IRDLVAAIVRIEPRGKRSS 11 RDL + + PRGK S+ Sbjct: 172 ARDLALRLKEV-PRGKISA 189