BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027369
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   162   5e-38
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              146   4e-33
ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-30
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   135   8e-30
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]   132   4e-29

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
           vinifera]
          Length = 1740

 Score =  162 bits (410), Expect = 5e-38
 Identities = 89/212 (41%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
 Frame = +2

Query: 2   YNLIQQTCFFCLHFRAERSLVETYTAQLEMIGKGDIIEARRLDEANSPNLXXXXXXXXXX 181
           +NL+Q+TCFFC HF+   SLV+ Y +QLE+I KGD++ A+ LD  +              
Sbjct: 146 HNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSH 205

Query: 182 XXXXXXXXXXAQRKSSDSQKQHAWSSLQFTEARSVLKKFWKLKTVKCKTCGAKNPQITKP 361
                     A+   S   KQ  W+SLQ  EA SV+  F KLK   CK C AK+PQ+TKP
Sbjct: 206 VSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKP 265

Query: 362 TFGWIHTSGMSAADARANIIRGCKLKGPYSD-GEDKISTEEVSVNEV-TWENDLDTAENN 535
           TFGW H +G+S A  RAN+IRG KL+ P S   E+K S+E  +VN++  W + +DT E +
Sbjct: 266 TFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETH 325

Query: 536 SCTTTSVGIQDSRTKRHVKNVGGVSSQFSNQK 631
           S    + GIQD+ TKR  +       +F  QK
Sbjct: 326 SSIAPTDGIQDTVTKRLERKGAQAPIEFIKQK 357


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  146 bits (368), Expect = 4e-33
 Identities = 82/210 (39%), Positives = 108/210 (51%)
 Frame = +2

Query: 2   YNLIQQTCFFCLHFRAERSLVETYTAQLEMIGKGDIIEARRLDEANSPNLXXXXXXXXXX 181
           +NL+Q+TCFFC HF+   SLV+ Y +QLE+I KGD++ A+ LD  +              
Sbjct: 97  HNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSH 156

Query: 182 XXXXXXXXXXAQRKSSDSQKQHAWSSLQFTEARSVLKKFWKLKTVKCKTCGAKNPQITKP 361
                     A+   S   KQ  W+SLQ  EA SV+  F KLK   CK C AK+PQ+TKP
Sbjct: 157 VSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKP 216

Query: 362 TFGWIHTSGMSAADARANIIRGCKLKGPYSDGEDKISTEEVSVNEVTWENDLDTAENNSC 541
           TFGW H +G+S A  RAN+IRG KL+ P                     N +DT E +S 
Sbjct: 217 TFGWFHMAGLSDAQTRANVIRGSKLERPL--------------------NGVDTDETHSS 256

Query: 542 TTTSVGIQDSRTKRHVKNVGGVSSQFSNQK 631
              + GIQD+ TKR  +       +F  QK
Sbjct: 257 IAPTDGIQDTVTKRLERKGAQAPIEFIKQK 286


>ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|222854025|gb|EEE91572.1|
           predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  135 bits (340), Expect = 6e-30
 Identities = 76/211 (36%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
 Frame = +2

Query: 2   YNLIQQTCFFCLHFRAERSLVETYTAQLEMIGKGDIIEARRLDEANSPNLXXXXXXXXXX 181
           + L+Q+TCFFC HFRA+ + VE + +QLE+I KGD++ A+RLD   SP            
Sbjct: 95  HKLLQRTCFFCFHFRADSNQVEKFVSQLELIIKGDVVGAKRLDSF-SPIEASLPEDSDGS 153

Query: 182 XXXXXXXXXXAQRKSSDSQKQHAWSSLQFTEARSVLKKFWKLKTVKCKTCGAKNPQITKP 361
                     A+  +++  KQ  W+SLQ +EA S+L  F KL++ KCK C A NP I KP
Sbjct: 154 SESCSTIHSGARHPNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKP 213

Query: 362 TFGWIHTSGMSAADARANIIRGCKLKGPYSDG-EDKISTEEVSVNEVTWENDLDTAENNS 538
           TFGW H +G+S A  R+N+I+   ++GP+    E+ I  E+                   
Sbjct: 214 TFGWFHWAGLSNAAIRSNLIKQQTIEGPFGGAFEELIDAED------------------- 254

Query: 539 CTTTSVGIQDSRTKRHVKNVGGVSSQFSNQK 631
             T S   ++S T R++K    +  QF++QK
Sbjct: 255 -ATKSPSNKESATNRNLKEHQKLQHQFTSQK 284


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score =  135 bits (339), Expect = 8e-30
 Identities = 83/210 (39%), Positives = 106/210 (50%)
 Frame = +2

Query: 2   YNLIQQTCFFCLHFRAERSLVETYTAQLEMIGKGDIIEARRLDEANSPNLXXXXXXXXXX 181
           + L+Q+TCF C HFR +R  VE    QLE+I KGDI+ A+RL E+ SP+           
Sbjct: 100 HKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGAKRL-ESVSPSEALYPEESDLS 158

Query: 182 XXXXXXXXXXAQRKSSDSQKQHAWSSLQFTEARSVLKKFWKLKTVKCKTCGAKNPQITKP 361
                      Q    +  +Q  W+SLQFTEA SVL  F K K  KCK C + NP ITKP
Sbjct: 159 HESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKP 218

Query: 362 TFGWIHTSGMSAADARANIIRGCKLKGPYSDGEDKISTEEVSVNEVTWENDLDTAENNSC 541
           TFGW HTSGMS A  RAN+I G +L G             +  +E+    D++ A     
Sbjct: 219 TFGWFHTSGMSDASIRANVITGHQLGG-------------LLGSEIEGTTDVEDA----- 260

Query: 542 TTTSVGIQDSRTKRHVKNVGGVSSQFSNQK 631
                G Q S TK+H K       +F+ QK
Sbjct: 261 --AEPGDQHSGTKKHKKKERKEVLEFTRQK 288


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  132 bits (333), Expect = 4e-29
 Identities = 79/201 (39%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
 Frame = +2

Query: 35  LHFRAERSLVETYTAQLEMIGKGDIIEARRLDEANSPNLXXXXXXXXXXXXXXXXXXXXA 214
           +HF A+   V+ Y +QLE+I KGD++ A+ LD  +                        A
Sbjct: 180 VHFIAQ---VQKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSA 236

Query: 215 QRKSSDSQKQHAWSSLQFTEARSVLKKFWKLKTVKCKTCGAKNPQITKPTFGWIHTSGMS 394
           +   S   KQ  W+SLQ  EA SV+  F KLK   CK C AK+PQ+TKPTFGW H +G+S
Sbjct: 237 RDNCSVHLKQQEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLS 296

Query: 395 AADARANIIRGCKLKGPYSD-GEDKISTEEVSVNEV-TWENDLDTAENNSCTTTSVGIQD 568
            A  RAN+IRG KL+ P S   E+K S+E  +VN++  W + +DT E +S    + GIQD
Sbjct: 297 DAQTRANVIRGSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQD 356

Query: 569 SRTKRHVKNVGGVSSQFSNQK 631
           + TK   +       +F  QK
Sbjct: 357 TVTKXLERKGAQAPIEFIKQK 377