BLASTX nr result

ID: Panax21_contig00027357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027357
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    61   1e-07
ref|XP_003333370.1| hAT family dimerization domain-containing pr...    59   3e-07
ref|NP_001068267.2| Os11g0613900 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EEE52457.1| hypothetical protein OsJ_34617 [Oryza sativa Japo...    56   4e-06
ref|ZP_01682798.1| hypothetical protein VCV52_B0154 [Vibrio chol...    55   5e-06

>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -1

Query: 430 FLHMRR-AHSLNLVVKDCLQE*TQSYLKF*NVIQYVMSSPLE*GNFKKCVERKKTDCYSL 254
           + HMR  AH LNL+VKD L++  +S L+    + YV SSPL    FK  ++ +     S 
Sbjct: 289 YFHMRCCAHVLNLIVKDGLEDMDESILRIRQAVWYVRSSPLRLSKFKGLIDEQSVGGKSS 348

Query: 253 VSFDVETM*NSTNLMVKLALKFKMTY 176
           V  DVET  N+T LM   ALK + T+
Sbjct: 349 VCLDVETRWNTTYLMAAAALKHEKTF 374


>ref|XP_003333370.1| hAT family dimerization domain-containing protein [Puccinia
           graminis f. sp. tritici CRL 75-36-700-3]
          Length = 674

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = -1

Query: 430 FLHMR-RAHSLNLVVKDCLQE*TQSYLKF*NVIQYVMSSPLE*GNFKKCVERKKTDCYSL 254
           F H+R  AH +NLVVKD L+  TQS +K  + ++Y  SSPL    FK  +        +L
Sbjct: 321 FFHVRCAAHIINLVVKDGLKGVTQSIVKICDSVRYSKSSPLRKQEFKDAIRSSHMKKQAL 380

Query: 253 VSFDVETM*NSTNLMVKLALKFK 185
            S DV T  NSTN M+K AL +K
Sbjct: 381 PSVDVPTRWNSTNQMLKSALPYK 403


>ref|NP_001068267.2| Os11g0613900 [Oryza sativa Japonica Group]
           gi|77552015|gb|ABA94812.1| hAT family dimerisation
           domain containing protein [Oryza sativa Japonica Group]
           gi|255680263|dbj|BAF28630.2| Os11g0613900 [Oryza sativa
           Japonica Group]
          Length = 709

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -1

Query: 430 FLHMRR-AHSLNLVVKDCLQE*TQSYLKF*NVIQYVMSSPLE*GNFKKCVERKKTDCYSL 254
           FLHMR  AH +NL+V D L+E  +S  +    I++V + P     FKKC E  K    + 
Sbjct: 301 FLHMRCVAHIINLIVADGLKEINKSICRVRAAIKFVKAGPARLAKFKKCAELAKVQTKAF 360

Query: 253 VSFDVETM*NSTNLMVKLALKFKMTY 176
           ++ DV TM NST  M+ +A +++  +
Sbjct: 361 LTLDVCTMWNSTYHMLNIAQQYEKAF 386


>gb|EEE52457.1| hypothetical protein OsJ_34617 [Oryza sativa Japonica Group]
          Length = 697

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -1

Query: 430 FLHMRR-AHSLNLVVKDCLQE*TQSYLKF*NVIQYVMSSPLE*GNFKKCVERKKTDCYSL 254
           FLHMR  AH +NL+V D L+E  +S  +    I++V + P     FKKC E  K    + 
Sbjct: 301 FLHMRCVAHIINLIVADGLKEINKSICRVRAAIKFVKAGPARLAKFKKCAELAKVQTKAF 360

Query: 253 VSFDVETM*NSTNLMVKLALKFKMTY 176
           ++ DV TM NST  M+ +A +++  +
Sbjct: 361 LTLDVCTMWNSTYHMLNIAQQYEKAF 386


>ref|ZP_01682798.1| hypothetical protein VCV52_B0154 [Vibrio cholerae V52]
           gi|121627761|gb|EAX60387.1| hypothetical protein
           VCV52_B0154 [Vibrio cholerae V52]
          Length = 111

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
 Frame = -1

Query: 403 LNLVVKDCLQE*TQSYLKF*NVIQYVMSSPLE*GNFKKCVERKKTDCYSLVSFDVETM*N 224
           LNL+V+D L+E   S  +   +++YV SS     NF KCVE +K +   ++S DV T  N
Sbjct: 1   LNLIVQDGLKEIGPSIKRVRQMVKYVRSSSTRTRNFLKCVEMQKIESDKMLSLDVPTRWN 60

Query: 223 STNLMVKLALKFKMT------YY*NFREFFSKQWC 137
           ST LM+  A KF+        Y  NF  F +   C
Sbjct: 61  STYLMLDTAEKFEKAFERFDLYDGNFNSFLATDVC 95


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