BLASTX nr result

ID: Panax21_contig00027310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027310
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vit...   234   8e-60
ref|XP_002526369.1| Auxin response factor, putative [Ricinus com...   210   9e-53
ref|XP_002313521.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isof...   200   9e-50
ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cuc...   200   9e-50

>ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
            gi|297746231|emb|CBI16287.3| unnamed protein product
            [Vitis vinifera]
          Length = 798

 Score =  234 bits (596), Expect = 8e-60
 Identities = 126/181 (69%), Positives = 141/181 (77%), Gaps = 6/181 (3%)
 Frame = -3

Query: 525  LSY-TNFPKENVPC-PSSLQSMVTRDEVTKLNLSREV---DVISSSPNFEANSSNNKDDP 361
            LSY +NFP+ENVP  PSS++S V   EV KLN+  E    + IS+ PN E N  + KDD 
Sbjct: 582  LSYASNFPRENVPFNPSSIRSGVIGTEVRKLNIPNEPKPPENISAPPNLETNLKHQKDDT 641

Query: 360  LSGMATGCKLFGFSLTGETS-TSQCSCKRSCTKVHKQGNLVGRAIDLSKLNGYDDLLIEL 184
             SG A GCKLFGFSLTGET   SQ S KRSCTKVHKQGNLVGRAIDLS+LNGY DL  EL
Sbjct: 642  FSGTAAGCKLFGFSLTGETPPNSQNSGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSEL 701

Query: 183  ERLFSMEGLLRDRVKGWRILFTDDENDMMVVGDDPWNEFRRMVSKIHIYTQEEVQKMMIG 4
            ERLF MEGLLRD  KGW+IL+TD ENDMMVVGDDPW+EF  +VSKIHIYTQEEV+KM IG
Sbjct: 702  ERLFGMEGLLRDPDKGWQILYTDSENDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 761

Query: 3    M 1
            +
Sbjct: 762  I 762


>ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
            gi|223534328|gb|EEF36040.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 810

 Score =  210 bits (535), Expect = 9e-53
 Identities = 113/178 (63%), Positives = 135/178 (75%), Gaps = 6/178 (3%)
 Frame = -3

Query: 516  TNFPKENVPCPS-SLQSMVTRDEVTKLNLSREVDVI---SSSPNFEANSSNNKDDPLSGM 349
            TNFP+EN    + S+Q+ V+RDEV K N   ++      S+SP    N  + KD+   G 
Sbjct: 581  TNFPRENFQFGAPSIQAGVSRDEVGKPNQLSDLKTQEPGSASPALGVNLRSQKDNSFGGT 640

Query: 348  ATGCKLFGFSLTGETST--SQCSCKRSCTKVHKQGNLVGRAIDLSKLNGYDDLLIELERL 175
            ++GCKLFGFSLT E+    SQ S KRSCTKVHKQG+LVGRAIDLS+LNGY DLL ELERL
Sbjct: 641  SSGCKLFGFSLTAESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERL 700

Query: 174  FSMEGLLRDRVKGWRILFTDDENDMMVVGDDPWNEFRRMVSKIHIYTQEEVQKMMIGM 1
            FSMEGLL+D  KGWRIL+TD END+MVVGDDPW+EF  +VSKIHIYTQEEV+KM IG+
Sbjct: 701  FSMEGLLQDPNKGWRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGV 758


>ref|XP_002313521.1| predicted protein [Populus trichocarpa] gi|222849929|gb|EEE87476.1|
            predicted protein [Populus trichocarpa]
          Length = 713

 Score =  209 bits (533), Expect = 2e-52
 Identities = 114/177 (64%), Positives = 133/177 (75%), Gaps = 5/177 (2%)
 Frame = -3

Query: 522  SYTNFPKENVPC-PSSLQSMVTRDEVTKLNLSREV---DVISSSPNFEANSSNNKDDPLS 355
            SY  F +EN     SS+Q+ V R+EV K N S E    + IS++P   AN  N KDD  +
Sbjct: 509  SYAIFSRENAHFNTSSIQTCVVREEVRKPNQSSEYKTQESISAAPALCANLRNQKDDFFN 568

Query: 354  GMATGCKLFGFSLTGETS-TSQCSCKRSCTKVHKQGNLVGRAIDLSKLNGYDDLLIELER 178
            G ATGCKLFGFSL  ETS  SQ + KRSCTKVHKQG+LVGRAIDLS+LNGY DLL ELER
Sbjct: 569  GNATGCKLFGFSLNAETSPNSQNTSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELER 628

Query: 177  LFSMEGLLRDRVKGWRILFTDDENDMMVVGDDPWNEFRRMVSKIHIYTQEEVQKMMI 7
            LFSMEGLLR+  +GWRIL+TD END+MVVGDDPW EF  + +KIHIYTQEEV+KM +
Sbjct: 629  LFSMEGLLRNPEEGWRILYTDSENDVMVVGDDPWLEFCNVATKIHIYTQEEVEKMTL 685


>ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  200 bits (509), Expect = 9e-50
 Identities = 108/177 (61%), Positives = 138/177 (77%), Gaps = 5/177 (2%)
 Frame = -3

Query: 516  TNFPKENVPC-PSSLQSMV--TRDEVTKLNLSRE-VDVISSSPNFEANSSNNKDDPLSGM 349
            +NFP+E+    PS++ + V  T+ E T  +L RE + + S+ P   +N  N+KD+ ++  
Sbjct: 590  SNFPRESALFNPSAVGANVIRTKMERTSRSLDRESLHLASAPPTLGSNMRNSKDEHVNDN 649

Query: 348  ATGCKLFGFSLTGETSTS-QCSCKRSCTKVHKQGNLVGRAIDLSKLNGYDDLLIELERLF 172
            ATGCKLFGFSLT ET+T+ Q S KRSCTKVHKQG+LVGRAIDLS+LNGY DL+ ELERLF
Sbjct: 650  ATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLF 709

Query: 171  SMEGLLRDRVKGWRILFTDDENDMMVVGDDPWNEFRRMVSKIHIYTQEEVQKMMIGM 1
            SMEGLL+D  KGWR+L+TD+END+MVVGD PW++F   VSKIHIYTQEEV+KM  G+
Sbjct: 710  SMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNGV 766


>ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
            gi|449524946|ref|XP_004169482.1| PREDICTED: auxin
            response factor 4-like isoform 2 [Cucumis sativus]
          Length = 733

 Score =  200 bits (509), Expect = 9e-50
 Identities = 108/177 (61%), Positives = 138/177 (77%), Gaps = 5/177 (2%)
 Frame = -3

Query: 516  TNFPKENVPC-PSSLQSMV--TRDEVTKLNLSRE-VDVISSSPNFEANSSNNKDDPLSGM 349
            +NFP+E+    PS++ + V  T+ E T  +L RE + + S+ P   +N  N+KD+ ++  
Sbjct: 521  SNFPRESALFNPSAVGANVIRTKMERTSRSLDRESLHLASAPPTLGSNMRNSKDEHVNDN 580

Query: 348  ATGCKLFGFSLTGETSTS-QCSCKRSCTKVHKQGNLVGRAIDLSKLNGYDDLLIELERLF 172
            ATGCKLFGFSLT ET+T+ Q S KRSCTKVHKQG+LVGRAIDLS+LNGY DL+ ELERLF
Sbjct: 581  ATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLF 640

Query: 171  SMEGLLRDRVKGWRILFTDDENDMMVVGDDPWNEFRRMVSKIHIYTQEEVQKMMIGM 1
            SMEGLL+D  KGWR+L+TD+END+MVVGD PW++F   VSKIHIYTQEEV+KM  G+
Sbjct: 641  SMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNGV 697


Top