BLASTX nr result

ID: Panax21_contig00027306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027306
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like...   362   8e-98
ref|XP_003589458.1| Transcription factor bHLH140, partial [Medic...   323   3e-86
ref|XP_002323598.1| predicted protein [Populus trichocarpa] gi|2...   317   3e-84
ref|XP_003516953.1| PREDICTED: transcription factor bHLH140-like...   315   8e-84
ref|XP_002530499.1| aprataxin, putative [Ricinus communis] gi|22...   314   2e-83

>ref|XP_002270443.2| PREDICTED: transcription factor bHLH140-like [Vitis vinifera]
          Length = 734

 Score =  362 bits (928), Expect = 8e-98
 Identities = 181/284 (63%), Positives = 215/284 (75%), Gaps = 3/284 (1%)
 Frame = -2

Query: 845  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGQALDTATKERAGSLMPGKALVVPLPSTS 666
            GGLRCN IANAANWRLKPGGGG NAAI+SAAG  L+  TK+RAGSL+PGKALVVPLPSTS
Sbjct: 329  GGLRCNAIANAANWRLKPGGGGANAAIFSAAGPELEVETKKRAGSLIPGKALVVPLPSTS 388

Query: 665  PLFSREGITHVIHVLGPNMNPMRPNCLDNDYNKGCKVLRETYSSLFEGFASIIRTQEKLT 486
            PLFSREG+THVIHVLGPNMN  RPNCL+NDY KG KVLRE Y+SLFEGFASI+ TQ  L 
Sbjct: 389  PLFSREGVTHVIHVLGPNMNRQRPNCLNNDYVKGSKVLREAYTSLFEGFASIMNTQGNLL 448

Query: 485  KESSERVGSE---TKDHFELGPLNQFPITDQKVKREGVYESEGNKKCKGSKNELESNISN 315
            + SSE + SE   ++DHF+   +   P  DQK+KR GVYESE +KKCKG ++E E + + 
Sbjct: 449  EGSSENLRSELSVSQDHFKGNHIKNVPNHDQKIKRVGVYESETSKKCKGFQDEHEFDCTE 508

Query: 314  FMDINEDQSNEKSGESMAKAWGSWAQALYNIAMHPEKHKNDVMEISDDFLVLNDQYPKAQ 135
              +  +  +NEK G +M K WGSWAQ+LY+IAMHPEKHK++++EISDD +VLND YPKAQ
Sbjct: 509  SKEGKDKLNNEKIGRNMTKTWGSWAQSLYHIAMHPEKHKDNLIEISDDVVVLNDLYPKAQ 568

Query: 134  KHXXXXXXXXXXXXXXXXRTEHLQLLKTMHNVGLKWAEKLLTEN 3
            +H                  EHLQLL+TMH VGLKWAEK L E+
Sbjct: 569  RHLLVLARSEGLDCLADVGGEHLQLLRTMHAVGLKWAEKFLCED 612


>ref|XP_003589458.1| Transcription factor bHLH140, partial [Medicago truncatula]
            gi|355478506|gb|AES59709.1| Transcription factor bHLH140,
            partial [Medicago truncatula]
          Length = 639

 Score =  323 bits (828), Expect = 3e-86
 Identities = 163/284 (57%), Positives = 204/284 (71%), Gaps = 3/284 (1%)
 Frame = -2

Query: 845  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGQALDTATKERAGSLMPGKALVVPLPSTS 666
            GGLRCNVIANAANWRLKPGGGGVNA+I+ AAG  L++ATKE+A ++ PG A+VVPLPS+S
Sbjct: 355  GGLRCNVIANAANWRLKPGGGGVNASIFDAAGPELESATKEKAKTVSPGNAVVVPLPSSS 414

Query: 665  PLFSREGITHVIHVLGPNMNPMRPNCLDNDYNKGCKVLRETYSSLFEGFASIIRTQEKLT 486
            PLF+REG+THVIHVLGPNMNP RPNCL+NDY +GCKVL++ Y+SLFEGFASI+R     T
Sbjct: 415  PLFTREGVTHVIHVLGPNMNPQRPNCLNNDYERGCKVLQDAYASLFEGFASIVRN----T 470

Query: 485  KESSERVGS---ETKDHFELGPLNQFPITDQKVKREGVYESEGNKKCKGSKNELESNISN 315
               +E +G    E +D  E    N    TDQK KR+  +E E +KK KG+ +  ++  + 
Sbjct: 471  VHQNENLGKKSLELQDQSEQCSRN----TDQKSKRDADHELEKSKKYKGTHDGFDTTFTG 526

Query: 314  FMDINEDQSNEKSGESMAKAWGSWAQALYNIAMHPEKHKNDVMEISDDFLVLNDQYPKAQ 135
              D   D  ++++  S  KAWGSWAQAL+ IAMHPEKHK+D++EIS+D +VLND YPKAQ
Sbjct: 527  SRDEKVDSEHKRTDGSTKKAWGSWAQALHLIAMHPEKHKDDLLEISEDIVVLNDMYPKAQ 586

Query: 134  KHXXXXXXXXXXXXXXXXRTEHLQLLKTMHNVGLKWAEKLLTEN 3
            KH                + EHL +LK MH VGLKWAEK L+EN
Sbjct: 587  KHVLVLARSGGLDCLSDVQNEHLSVLKRMHAVGLKWAEKFLSEN 630


>ref|XP_002323598.1| predicted protein [Populus trichocarpa] gi|222868228|gb|EEF05359.1|
            predicted protein [Populus trichocarpa]
          Length = 718

 Score =  317 bits (811), Expect = 3e-84
 Identities = 163/287 (56%), Positives = 203/287 (70%), Gaps = 6/287 (2%)
 Frame = -2

Query: 845  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGQALDTATKERAGSLMPGKALVVPLPSTS 666
            GGLRCN IANAANWRLKPGGGGVNAAI++AAG +L+TATKERA SL+PG A+VVPLPS S
Sbjct: 316  GGLRCNAIANAANWRLKPGGGGVNAAIFAAAGPSLETATKERAKSLLPGHAVVVPLPSDS 375

Query: 665  PLFSREGITHVIHVLGPNMNPMRPNCLDNDYNKGCKVLRETYSSLFEGFASIIRTQEKLT 486
            PL++RE ++HVIHVLGPNMNP RPN L+NDY KGC +LRE Y+SLF GF SI+R++ KL 
Sbjct: 376  PLYTREEVSHVIHVLGPNMNPQRPNSLNNDYTKGCSILREAYTSLFTGFLSIVRSRSKLP 435

Query: 485  KESSERVGSETKDHFE--LGPLNQFPITDQKVKREGVYESEGNKKCKGSKNELESNI--- 321
            +   E++ S   D  +   GP N    +DQK+KR+     E +KKCKG+ +E  ++I   
Sbjct: 436  RRIIEKLESSPSDLKDPSHGPRNHLTNSDQKIKRDDDCVYERSKKCKGTHDETVADISAP 495

Query: 320  -SNFMDINEDQSNEKSGESMAKAWGSWAQALYNIAMHPEKHKNDVMEISDDFLVLNDQYP 144
             S +  +  D+S  +   S  K+WGSWAQALY+IAMHPEKHK+ ++E+ DD +VLND YP
Sbjct: 496  SSTYGKVTGDKSKLEGPTS--KSWGSWAQALYHIAMHPEKHKDKLLEVLDDVVVLNDLYP 553

Query: 143  KAQKHXXXXXXXXXXXXXXXXRTEHLQLLKTMHNVGLKWAEKLLTEN 3
            KA KH                  EHLQLL TMH VGLKWAEK L E+
Sbjct: 554  KACKHLLVLARHEGLDCLADVHQEHLQLLMTMHAVGLKWAEKFLHED 600


>ref|XP_003516953.1| PREDICTED: transcription factor bHLH140-like [Glycine max]
          Length = 734

 Score =  315 bits (807), Expect = 8e-84
 Identities = 165/290 (56%), Positives = 204/290 (70%), Gaps = 9/290 (3%)
 Frame = -2

Query: 845  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGQALDTATKERAGSLMPGKALVVPLPSTS 666
            GGLRCNVIANAANWRL PGGGGVNAAI++AAG  L++ATKE+  SL PG A VVPLPS+S
Sbjct: 330  GGLRCNVIANAANWRLNPGGGGVNAAIFNAAGPELESATKEKVQSLSPGNAAVVPLPSSS 389

Query: 665  PLFSREGITHVIHVLGPNMNPMRPNCLDNDYNKGCKVLRETYSSLFEGFASIIRTQ---- 498
            PLF+REG+THVIHV+GPNMNP RPNCL+NDYNKGCK+L++ Y+SLFEGFASI+R Q    
Sbjct: 390  PLFTREGVTHVIHVVGPNMNPQRPNCLNNDYNKGCKILQDAYTSLFEGFASIVRNQTWHP 449

Query: 497  ----EKLTKESSE-RVGSETKDHFELGPLNQFPITDQKVKREGVYESEGNKKCKGSKNEL 333
                E L ++S E +V S+          N F  TDQK KR+  +    +KK KG++++ 
Sbjct: 450  VGKSENLERKSLELQVQSDCS-------RNYFTKTDQKSKRDVDHGLGKSKKYKGTRDDS 502

Query: 332  ESNISNFMDINEDQSNEKSGESMAKAWGSWAQALYNIAMHPEKHKNDVMEISDDFLVLND 153
                ++  + N D S  ++  SM K WGSWAQAL+ IAMHPEK K+D++EISDD +VLND
Sbjct: 503  GLTFTDSRNENVD-SEHRTERSMTKTWGSWAQALHQIAMHPEKLKDDLLEISDDVVVLND 561

Query: 152  QYPKAQKHXXXXXXXXXXXXXXXXRTEHLQLLKTMHNVGLKWAEKLLTEN 3
             YPKA+KH                + EHLQLL  MH+VGLKWAEK L EN
Sbjct: 562  MYPKARKHVLVLARTGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNEN 611


>ref|XP_002530499.1| aprataxin, putative [Ricinus communis] gi|223529956|gb|EEF31883.1|
            aprataxin, putative [Ricinus communis]
          Length = 749

 Score =  314 bits (804), Expect = 2e-83
 Identities = 162/286 (56%), Positives = 199/286 (69%), Gaps = 5/286 (1%)
 Frame = -2

Query: 845  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGQALDTATKERAGSLMPGKALVVPLPSTS 666
            GGLRCNVIANAANWRLKPGGGGVNAAIYSAAG AL+ ATKE A SL+PG A+VVPLPS S
Sbjct: 345  GGLRCNVIANAANWRLKPGGGGVNAAIYSAAGPALEVATKELATSLLPGHAVVVPLPSNS 404

Query: 665  PLFSREGITHVIHVLGPNMNPMRPNCLDNDYNKGCKVLRETYSSLFEGFASIIRTQEKLT 486
            PL+ REG++H+IHVLGPNMNP RPNCL+ DY KGCK+L + Y+SLF GF SI++ Q K  
Sbjct: 405  PLYHREGVSHIIHVLGPNMNPQRPNCLNGDYAKGCKILSDAYTSLFGGFVSILQNQAKSG 464

Query: 485  KESSERVGSET-KDHFELGPLNQFPITDQKVKREGVYESEGNKKCKGSKNELESNIS--- 318
            K     V  ++ +D     P N     DQK+KR+  Y +E +KK KGS+NE   N +   
Sbjct: 465  KSRENLVSDQSLQDMSHDIPRNILTNGDQKIKRDDDYMTEKSKKYKGSQNETRVNSTGSG 524

Query: 317  -NFMDINEDQSNEKSGESMAKAWGSWAQALYNIAMHPEKHKNDVMEISDDFLVLNDQYPK 141
              +  I+ D  N K   S +K+W SWAQALY+IAM PE+HK++++EISDD +VLND YPK
Sbjct: 525  CTYGKISRD--NSKIDGSTSKSWNSWAQALYHIAMRPERHKDELLEISDDVVVLNDLYPK 582

Query: 140  AQKHXXXXXXXXXXXXXXXXRTEHLQLLKTMHNVGLKWAEKLLTEN 3
            AQKH                  EH+QLL TMH VGLKWA++ L E+
Sbjct: 583  AQKHLLVLARYPGLDGLADVHEEHIQLLTTMHTVGLKWAKRFLHED 628


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