BLASTX nr result

ID: Panax21_contig00027286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027286
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulat...   154   9e-36
ref|XP_003633172.1| PREDICTED: 26S proteasome non-ATPase regulat...   141   5e-32
ref|XP_002309347.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
gb|ABK93413.1| unknown [Populus trichocarpa]                          137   7e-31
ref|XP_002278908.1| PREDICTED: 26S proteasome non-ATPase regulat...   137   1e-30

>ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 2 [Vitis vinifera] gi|297743643|emb|CBI36526.3|
           unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/122 (65%), Positives = 94/122 (77%), Gaps = 5/122 (4%)
 Frame = -1

Query: 353 RSALEAEMNGIIDRLCQPGGPGLSGNLVDSEGFPRSDFDIPVVRADRLRLAELRNDYKDV 174
           R+ LEA+MN II RLCQPGGPG+SG+LVDSEGFPRSD DIP VRA+R RLAELRNDYKD+
Sbjct: 17  RTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVRAERQRLAELRNDYKDI 76

Query: 173 TEKINQNIQVLHSAKLAPSSAHNKDLGIIGGSNSQGMFVANGGTSAVSGGI-----IGAM 9
           TEKIN+NIQ+LHSA+LAP S+ +KDL    GSN+QG   A    SA S  +     + AM
Sbjct: 77  TEKINENIQLLHSARLAPRSSLHKDLDNDEGSNNQGSSTATAVPSAASHNVLPRDTLTAM 136

Query: 8   DV 3
           DV
Sbjct: 137 DV 138


>ref|XP_003633172.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 3 [Vitis vinifera]
          Length = 210

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/86 (77%), Positives = 78/86 (90%)
 Frame = -1

Query: 353 RSALEAEMNGIIDRLCQPGGPGLSGNLVDSEGFPRSDFDIPVVRADRLRLAELRNDYKDV 174
           R+ LEA+MN II RLCQPGGPG+SG+LVDSEGFPRSD DIP VRA+R RLAELRNDYKD+
Sbjct: 17  RTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVRAERQRLAELRNDYKDI 76

Query: 173 TEKINQNIQVLHSAKLAPSSAHNKDL 96
           TEKIN+NIQ+LHSA+LAP S+ +KDL
Sbjct: 77  TEKINENIQLLHSARLAPRSSLHKDL 102


>ref|XP_002309347.1| predicted protein [Populus trichocarpa] gi|222855323|gb|EEE92870.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = -1

Query: 353 RSALEAEMNGIIDRLCQPGGPGLSGNLVDSEGFPRSDFDIPVVRADRLRLAELRNDYKDV 174
           RSALE EMN IIDRLCQPGGPGLSGNLVDSEGFPRSD DIPVVRA+R RLAELRND+K++
Sbjct: 17  RSALETEMNVIIDRLCQPGGPGLSGNLVDSEGFPRSDIDIPVVRAERHRLAELRNDHKEI 76

Query: 173 TEKINQNIQVLHSAKLA 123
           TEKIN+NIQVLHSA+LA
Sbjct: 77  TEKINENIQVLHSARLA 93


>gb|ABK93413.1| unknown [Populus trichocarpa]
          Length = 216

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = -1

Query: 353 RSALEAEMNGIIDRLCQPGGPGLSGNLVDSEGFPRSDFDIPVVRADRLRLAELRNDYKDV 174
           RSALE EMN IIDRLCQPGGPGLSGNLVDSEGFPRSD DIPVVRA+R RLAELRND+K++
Sbjct: 17  RSALETEMNVIIDRLCQPGGPGLSGNLVDSEGFPRSDIDIPVVRAERHRLAELRNDHKEI 76

Query: 173 TEKINQNIQVLHSAKLA 123
           TEKIN+NIQVLHSA+LA
Sbjct: 77  TEKINENIQVLHSARLA 93


>ref|XP_002278908.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 1 [Vitis vinifera]
          Length = 216

 Score =  137 bits (344), Expect = 1e-30
 Identities = 74/122 (60%), Positives = 86/122 (70%), Gaps = 5/122 (4%)
 Frame = -1

Query: 353 RSALEAEMNGIIDRLCQPGGPGLSGNLVDSEGFPRSDFDIPVVRADRLRLAELRNDYKDV 174
           R+ LEA+MN II RLCQPGGPG+SG+LVDSEGFPRSD DIP VRA+R RLAELRNDYKD+
Sbjct: 17  RTELEAQMNAIIQRLCQPGGPGISGSLVDSEGFPRSDIDIPTVRAERQRLAELRNDYKDI 76

Query: 173 TEKINQNIQVLHSAKLAPSSAHNKDLGIIGGSNSQGMFVANGGTSAVSGGI-----IGAM 9
           TEKIN+NIQ+LHSA+L              GSN+QG   A    SA S  +     + AM
Sbjct: 77  TEKINENIQLLHSARL--------------GSNNQGSSTATAVPSAASHNVLPRDTLTAM 122

Query: 8   DV 3
           DV
Sbjct: 123 DV 124


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