BLASTX nr result

ID: Panax21_contig00027258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027258
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ50544.1| hypothetical protein [Brassica rapa]                   253   2e-65
ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...   249   2e-64
ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-li...   244   6e-63
ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-li...   244   6e-63
gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]          244   8e-63

>gb|ABQ50544.1| hypothetical protein [Brassica rapa]
          Length = 218

 Score =  253 bits (646), Expect = 2e-65
 Identities = 117/136 (86%), Positives = 127/136 (93%)
 Frame = -3

Query: 576 KIIEINPHMLGTMAGGAADCQFWHRNLGIKGPGLYYVDSEGGRLKGTRFSVGSSSPYAYG 397
           KIIEINP+MLGTMAGGAADCQFWHRNLGIKGPGLYYVD+EGGRLKG RFSVGS SPYAYG
Sbjct: 79  KIIEINPYMLGTMAGGAADCQFWHRNLGIKGPGLYYVDNEGGRLKGDRFSVGSGSPYAYG 138

Query: 396 VLDSGYRYDMTLEEAAELARRSIYHATFRDGASGGTASVYYVGPNGWKKLSGDDVGELHY 217
           VLDSGY++DM++EEA+ELARRSIYHATFRDGASGG ASVY+VGPNGW KLSGDDVGELHY
Sbjct: 139 VLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPNGWTKLSGDDVGELHY 198

Query: 216 KYYPVEPSVVEQDMAE 169
            YYPV P++ EQ M E
Sbjct: 199 HYYPVPPAIAEQVMEE 214


>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
           gi|297738390|emb|CBI27591.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  249 bits (636), Expect = 2e-64
 Identities = 127/182 (69%), Positives = 132/182 (72%), Gaps = 45/182 (24%)
 Frame = -3

Query: 576 KIIEINPHMLGTMAGGAADCQFWHRNLGIK------------------------------ 487
           KIIEINP+MLGTMAGGAADCQFWHRNLGIK                              
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 486 ---------------GPGLYYVDSEGGRLKGTRFSVGSSSPYAYGVLDSGYRYDMTLEEA 352
                          GPGLYYVDSEGGRLKGTRFSVGS SPYAYGVLD+GYRYDM++EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSVEEA 207

Query: 351 AELARRSIYHATFRDGASGGTASVYYVGPNGWKKLSGDDVGELHYKYYPVEPSVVEQDMA 172
           AELARRSIYHATFRDGASGG ASVYYVGPNGWKKLSGDDVGELHYKYYPV PS VEQ+M 
Sbjct: 208 AELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYKYYPVMPSTVEQEMV 267

Query: 171 EV 166
           EV
Sbjct: 268 EV 269


>ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  244 bits (624), Expect = 6e-63
 Identities = 124/181 (68%), Positives = 130/181 (71%), Gaps = 45/181 (24%)
 Frame = -3

Query: 576 KIIEINPHMLGTMAGGAADCQFWHRNLGIK------------------------------ 487
           KIIEINP+MLGTMAGGAADCQFWHRNLGIK                              
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 486 ---------------GPGLYYVDSEGGRLKGTRFSVGSSSPYAYGVLDSGYRYDMTLEEA 352
                          GPGLYYVDSEGGRLKGTRFSVGS SPYAYGVLDSGYRYD+++EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEA 207

Query: 351 AELARRSIYHATFRDGASGGTASVYYVGPNGWKKLSGDDVGELHYKYYPVEPSVVEQDMA 172
           AELARR+IYHATFRDGASGG ASVYYVGPNGWKKLSGDDVGELHY YYPV PS VEQ+M 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMV 267

Query: 171 E 169
           E
Sbjct: 268 E 268


>ref|XP_003523139.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  244 bits (624), Expect = 6e-63
 Identities = 124/181 (68%), Positives = 130/181 (71%), Gaps = 45/181 (24%)
 Frame = -3

Query: 576 KIIEINPHMLGTMAGGAADCQFWHRNLGIK------------------------------ 487
           KIIEINP+MLGTMAGGAADCQFWHRNLGIK                              
Sbjct: 88  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 147

Query: 486 ---------------GPGLYYVDSEGGRLKGTRFSVGSSSPYAYGVLDSGYRYDMTLEEA 352
                          GPGLYYVDSEGGRLKGTRFSVGS SPYAYGVLDSGYRYD+++EEA
Sbjct: 148 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEA 207

Query: 351 AELARRSIYHATFRDGASGGTASVYYVGPNGWKKLSGDDVGELHYKYYPVEPSVVEQDMA 172
           AELARR+IYHATFRDGASGG ASVYYVGPNGWKKLSGDDVGELHY YYPV PS VEQ+M 
Sbjct: 208 AELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMV 267

Query: 171 E 169
           E
Sbjct: 268 E 268


>gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]
          Length = 194

 Score =  244 bits (623), Expect = 8e-63
 Identities = 124/182 (68%), Positives = 131/182 (71%), Gaps = 45/182 (24%)
 Frame = -3

Query: 576 KIIEINPHMLGTMAGGAADCQFWHRNLGIK------------------------------ 487
           KIIEINP+MLGTMAGGAADCQFWHRNLGIK                              
Sbjct: 10  KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 69

Query: 486 ---------------GPGLYYVDSEGGRLKGTRFSVGSSSPYAYGVLDSGYRYDMTLEEA 352
                          GPGLYYVDSEGGRLKGTRFSVGS SPYAYGVLDSGY++DM++EEA
Sbjct: 70  MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEA 129

Query: 351 AELARRSIYHATFRDGASGGTASVYYVGPNGWKKLSGDDVGELHYKYYPVEPSVVEQDMA 172
           AELARR+IYHATFRD ASGG ASVYYVGPNGWKKLSGDDVGELHY YYPV PS VEQ+MA
Sbjct: 130 AELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHYHYYPVTPSTVEQEMA 189

Query: 171 EV 166
           EV
Sbjct: 190 EV 191


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