BLASTX nr result

ID: Panax21_contig00027257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027257
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   291   6e-77
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   291   7e-77
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   277   1e-72
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   277   1e-72
emb|CBI16098.3| unnamed protein product [Vitis vinifera]              277   1e-72

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  291 bits (745), Expect = 6e-77
 Identities = 144/197 (73%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 ELYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGLGRMDHPPASKAAIESMP 411
           ELYYDDGAGSGLRPLPATMSEFL+GSGFDRLL+QLSQIE NG GR +HPPASKAA+ESMP
Sbjct: 114 ELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMP 173

Query: 410 TIEIDGDHVATELHCAVCKEAFEFGTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 231
           TIEI   H+ TELHCAVCKEAF+ G+EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP
Sbjct: 174 TIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 233

Query: 230 TDNNHEPNDSNRIQNEQSLTP-NNEEETVGLTIWRLPXXXXXXXXXXXXXXXXXXELPVV 54
           TD     N  + +   ++L+P  NEEETVGLTIWRLP                  ELPVV
Sbjct: 234 TDVPGTRN--SPVSGNEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVV 291

Query: 53  YTEMDGGFNNNGVPRRI 3
           YTEMDGGFNN+G PRRI
Sbjct: 292 YTEMDGGFNNSGAPRRI 308


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  291 bits (744), Expect = 7e-77
 Identities = 144/197 (73%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 ELYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGLGRMDHPPASKAAIESMP 411
           ELYYDDGAGSGLRPLPATMSEFL+GSGFDRLL+QLSQIE NG GR +HPPASKAA+ESMP
Sbjct: 224 ELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMP 283

Query: 410 TIEIDGDHVATELHCAVCKEAFEFGTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 231
           TIEI   H+ TELHCAVCKEAF+ G+EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP
Sbjct: 284 TIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 343

Query: 230 TDNNHEPNDSNRIQNEQSLTP-NNEEETVGLTIWRLPXXXXXXXXXXXXXXXXXXELPVV 54
           TD     N  + +   ++L+P  NEEETVGLTIWRLP                  ELPVV
Sbjct: 344 TDVPGTRN--SPVSGTEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVV 401

Query: 53  YTEMDGGFNNNGVPRRI 3
           YTEMDGGFNN+G PRRI
Sbjct: 402 YTEMDGGFNNSGAPRRI 418


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  277 bits (708), Expect = 1e-72
 Identities = 135/196 (68%), Positives = 155/196 (79%)
 Frame = -1

Query: 590 ELYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGLGRMDHPPASKAAIESMP 411
           ELYYDDG GSGLRPLP +MSEFLLGSGFDRLL+QLSQIE NG+GR ++PPASKAAIESMP
Sbjct: 111 ELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMP 170

Query: 410 TIEIDGDHVATELHCAVCKEAFEFGTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 231
           TI+I  +++ATE HCAVCKEAFE GTEAREMPCKHIYH DCILPWLS+RNSCPVCRHELP
Sbjct: 171 TIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELP 230

Query: 230 TDNNHEPNDSNRIQNEQSLTPNNEEETVGLTIWRLPXXXXXXXXXXXXXXXXXXELPVVY 51
           +DN +  + +   +N  S+T +N EE VGLTIWRLP                  ELPVVY
Sbjct: 231 SDNQNSLDAAESGENGGSVT-SNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 289

Query: 50  TEMDGGFNNNGVPRRI 3
           TE+DGGF N G+PRR+
Sbjct: 290 TEVDGGFTNGGLPRRV 305


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  277 bits (708), Expect = 1e-72
 Identities = 135/196 (68%), Positives = 155/196 (79%)
 Frame = -1

Query: 590 ELYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGLGRMDHPPASKAAIESMP 411
           ELYYDDG GSGLRPLP +MSEFLLGSGFDRLL+QLSQIE NG+GR ++PPASKAAIESMP
Sbjct: 114 ELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMP 173

Query: 410 TIEIDGDHVATELHCAVCKEAFEFGTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 231
           TI+I  +++ATE HCAVCKEAFE GTEAREMPCKHIYH DCILPWLS+RNSCPVCRHELP
Sbjct: 174 TIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELP 233

Query: 230 TDNNHEPNDSNRIQNEQSLTPNNEEETVGLTIWRLPXXXXXXXXXXXXXXXXXXELPVVY 51
           +DN +  + +   +N  S+T +N EE VGLTIWRLP                  ELPVVY
Sbjct: 234 SDNQNSLDAAESGENGGSVT-SNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 292

Query: 50  TEMDGGFNNNGVPRRI 3
           TE+DGGF N G+PRR+
Sbjct: 293 TEVDGGFTNGGLPRRV 308


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  277 bits (708), Expect = 1e-72
 Identities = 137/196 (69%), Positives = 146/196 (74%)
 Frame = -1

Query: 590 ELYYDDGAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGLGRMDHPPASKAAIESMP 411
           ELYYDDGAGSGLRPLPATMSEFL+GSGFDRLL+QLSQIE NG GR +HPPASKAA+ESMP
Sbjct: 230 ELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMP 289

Query: 410 TIEIDGDHVATELHCAVCKEAFEFGTEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 231
           TIEI   H+ TELHCAVCKEAF+ G+EAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP
Sbjct: 290 TIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELP 349

Query: 230 TDNNHEPNDSNRIQNEQSLTPNNEEETVGLTIWRLPXXXXXXXXXXXXXXXXXXELPVVY 51
           TD                +       TVGLTIWRLP                  ELPVVY
Sbjct: 350 TD----------------VPGTRNSPTVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVY 393

Query: 50  TEMDGGFNNNGVPRRI 3
           TEMDGGFNN+G PRRI
Sbjct: 394 TEMDGGFNNSGAPRRI 409


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