BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027132
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   283   5e-74
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   278   3e-73
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   278   3e-73
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   278   9e-73
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   276   2e-72

>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  283 bits (723), Expect = 5e-74
 Identities = 139/289 (48%), Positives = 195/289 (67%), Gaps = 1/289 (0%)
 Frame = +3

Query: 3    SIH*SHIWPPWITTAIVTDRDKIFVSIFWQTLFQLG-VKLCLSSAYHPQSDGQTERLNRC 179
            +IH  H  P      IVTDRD++F S F+Q +F+   VKL  S+A+HPQ+DGQTER+N+C
Sbjct: 1315 NIHKLHGMP----MVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQC 1370

Query: 180  LECYLRCMCSEHPKKWWNWLSLAQWWYNTNYHTALKCTPFQALFGLPPPHLNFHQIQNSR 359
            LE YLR M  + P+KW++WL+LA+WWYNT YHT+++ TPFQAL+G PPP +    I  + 
Sbjct: 1371 LESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGYPPPQITEFAIPCNM 1430

Query: 360  IPAVDTFIRERCGVLVDLRSTLLQAQVRMKNYSDQHRTERSFAIGDSVFLKLQPYKQSTL 539
                   + ++  +L  L+S++ +AQ R+K Y+D+ R+ER+  +GD V+LKLQPY+Q  +
Sbjct: 1431 SEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAM 1490

Query: 540  AQRSSFKLAPRFYGPYMVLAKVGPVAYKLDLPSHAQIHNVFHVSLLKKQIGSQARVSPTL 719
              R S KL  ++YGP+ V+ K+G VAYKL LP  A IH VFHVS LKK +G++A   P L
Sbjct: 1491 GIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNL 1550

Query: 720  PPLAADGTPKIIPLAVLDRRVVKFHNRPKVEYLIHWANSSLEDASWEDA 866
            P +  DG  K  P AVL RR++  HN P  ++LI W N +  +A+WEDA
Sbjct: 1551 PAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWEDA 1599


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  278 bits (710), Expect(2) = 3e-73
 Identities = 139/278 (50%), Positives = 189/278 (67%), Gaps = 1/278 (0%)
 Frame = +3

Query: 36   ITTAIVTDRDKIFVSIFWQTLFQ-LGVKLCLSSAYHPQSDGQTERLNRCLECYLRCMCSE 212
            + T IV+DRD+IF S  W+ +F+  GVKL  SSAYHPQ+DGQ+ER+N+CLE YLRCM S 
Sbjct: 577  LPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSS 636

Query: 213  HPKKWWNWLSLAQWWYNTNYHTALKCTPFQALFGLPPPHLNFHQIQNSRIPAVDTFIRER 392
             P+KW   L  A+WWYNT +HT+L  +P+QAL G+ PP L    +  S +         +
Sbjct: 637  KPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAK 696

Query: 393  CGVLVDLRSTLLQAQVRMKNYSDQHRTERSFAIGDSVFLKLQPYKQSTLAQRSSFKLAPR 572
              +L  ++S L++AQ RMK ++DQHR ER+  +GD V+LK+QPY+ ++L   SS KL  R
Sbjct: 697  AALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSR 756

Query: 573  FYGPYMVLAKVGPVAYKLDLPSHAQIHNVFHVSLLKKQIGSQARVSPTLPPLAADGTPKI 752
            +YGP+ VL ++G VAYKL LP  +QIH+VFHVS LKK +GS+A     LP + A+G    
Sbjct: 757  YYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILS 816

Query: 753  IPLAVLDRRVVKFHNRPKVEYLIHWANSSLEDASWEDA 866
             PLAVLDRR++  +N P V++ IHWAN     A+WEDA
Sbjct: 817  TPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDA 854



 Score = 24.6 bits (52), Expect(2) = 3e-73
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 7   FIDHIYGLHGLP 42
           F++H Y LHGLP
Sbjct: 567 FLEHFYKLHGLP 578


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  278 bits (710), Expect(2) = 3e-73
 Identities = 139/278 (50%), Positives = 189/278 (67%), Gaps = 1/278 (0%)
 Frame = +3

Query: 36   ITTAIVTDRDKIFVSIFWQTLFQ-LGVKLCLSSAYHPQSDGQTERLNRCLECYLRCMCSE 212
            + T IV+DRD+IF S  W+ +F+  GVKL  SSAYHPQ+DGQ+ER+N+CLE YLRCM S 
Sbjct: 356  LPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSS 415

Query: 213  HPKKWWNWLSLAQWWYNTNYHTALKCTPFQALFGLPPPHLNFHQIQNSRIPAVDTFIRER 392
             P+KW   L  A+WWYNT +HT+L  +P+QAL G+ PP L    +  S +         +
Sbjct: 416  KPRKWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAK 475

Query: 393  CGVLVDLRSTLLQAQVRMKNYSDQHRTERSFAIGDSVFLKLQPYKQSTLAQRSSFKLAPR 572
              +L  ++S L++AQ RMK ++DQHR ER+  +GD V+LK+QPY+ ++L   SS KL  R
Sbjct: 476  AALLETIKSHLVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSR 535

Query: 573  FYGPYMVLAKVGPVAYKLDLPSHAQIHNVFHVSLLKKQIGSQARVSPTLPPLAADGTPKI 752
            +YGP+ VL ++G VAYKL LP  +QIH+VFHVS LKK +GS+A     LP + A+G    
Sbjct: 536  YYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILS 595

Query: 753  IPLAVLDRRVVKFHNRPKVEYLIHWANSSLEDASWEDA 866
             PLAVLDRR++  +N P V++ IHWAN     A+WEDA
Sbjct: 596  TPLAVLDRRLIPRNNEPVVQWKIHWANLPESAATWEDA 633



 Score = 24.6 bits (52), Expect(2) = 3e-73
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 7   FIDHIYGLHGLP 42
           F++H Y LHGLP
Sbjct: 346 FLEHFYKLHGLP 357


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  278 bits (712), Expect = 9e-73
 Identities = 137/289 (47%), Positives = 193/289 (66%), Gaps = 1/289 (0%)
 Frame = +3

Query: 3    SIH*SHIWPPWITTAIVTDRDKIFVSIFWQTLFQLG-VKLCLSSAYHPQSDGQTERLNRC 179
            +IH  H  P     AIVTDRD++F S F+Q +F+   V+L  S+AYHPQ+DGQTER+N+C
Sbjct: 659  NIHKLHGMP----IAIVTDRDRVFTSTFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQC 714

Query: 180  LECYLRCMCSEHPKKWWNWLSLAQWWYNTNYHTALKCTPFQALFGLPPPHLNFHQIQNSR 359
            LE YLRCM  + P+ W +W++LA+WWYNT YHTA++ TPF+AL+G  PP ++   +    
Sbjct: 715  LESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDV 774

Query: 360  IPAVDTFIRERCGVLVDLRSTLLQAQVRMKNYSDQHRTERSFAIGDSVFLKLQPYKQSTL 539
                   + E+  ++  L++++  AQ RMK Y+D++RTER   +GD V+LKLQPY+Q+  
Sbjct: 775  SQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLEVGDMVYLKLQPYRQNAF 834

Query: 540  AQRSSFKLAPRFYGPYMVLAKVGPVAYKLDLPSHAQIHNVFHVSLLKKQIGSQARVSPTL 719
              R S KL  ++YGP+ VL KVG VAY+L LP  A IH VFHVS LKK +G+ A   P L
Sbjct: 835  GIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNL 894

Query: 720  PPLAADGTPKIIPLAVLDRRVVKFHNRPKVEYLIHWANSSLEDASWEDA 866
            P +  DG  K  P+AVL RR++  +N    ++LI W+N +  +A+WEDA
Sbjct: 895  PAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDA 943


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  276 bits (707), Expect(2) = 2e-72
 Identities = 134/275 (48%), Positives = 181/275 (65%), Gaps = 1/275 (0%)
 Frame = +3

Query: 45   AIVTDRDKIFVSIFWQTLFQ-LGVKLCLSSAYHPQSDGQTERLNRCLECYLRCMCSEHPK 221
            AIV+DRD+IF S  WQ LF+ + V+L  S+AYHPQ+DGQTER+N+C+E YLRCM  + PK
Sbjct: 1050 AIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPK 1109

Query: 222  KWWNWLSLAQWWYNTNYHTALKCTPFQALFGLPPPHLNFHQIQNSRIPAVDTFIRERCGV 401
            KW +WL LA+WWYNT +HTALK +PFQAL+G PPP +N   I          F+ E+  +
Sbjct: 1110 KWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVM 1169

Query: 402  LVDLRSTLLQAQVRMKNYSDQHRTERSFAIGDSVFLKLQPYKQSTLAQRSSFKLAPRFYG 581
            L  L+  L QAQ RMK Y+D +R+ER   +GD V+LK+QPY+ +    + + KL   FYG
Sbjct: 1170 LRRLKENLAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYG 1229

Query: 582  PYMVLAKVGPVAYKLDLPSHAQIHNVFHVSLLKKQIGSQARVSPTLPPLAADGTPKIIPL 761
            P+ V+ +VG VAY+L LP    IH VFH+S LK+  G+ +  SP LP +  DG  K  P 
Sbjct: 1230 PFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPS 1289

Query: 762  AVLDRRVVKFHNRPKVEYLIHWANSSLEDASWEDA 866
             V + R +  ++    ++L+ WAN   EDASWEDA
Sbjct: 1290 LVKETRAMPRNHTLVTQWLVQWANLPPEDASWEDA 1324



 Score = 23.1 bits (48), Expect(2) = 2e-72
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 1    RVFIDHIYGLHGLP 42
            + FID+I+ LHG P
Sbjct: 1035 QAFIDNIFKLHGFP 1048