BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027096
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32760.3| unnamed protein product [Vitis vinifera]              155   3e-44
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   155   7e-44
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...   122   8e-37
ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-...   112   4e-32
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor rpoD ...   109   9e-31

>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  155 bits (393), Expect(2) = 3e-44
 Identities = 96/185 (51%), Positives = 122/185 (65%), Gaps = 5/185 (2%)
 Frame = +3

Query: 168 LDGKHMETGFSAHEENDPVDSEKYLQEFQRQLLHWRGLWYLSPSLQMG-RIPSLSSTKQS 344
           L+ + ME   SA EEN   D  +Y+  F+RQLL   GLWY  PS Q G + P  SS  +S
Sbjct: 79  LEKRQMEIVVSADEENSD-DHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKS 137

Query: 345 LASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLDESLAPSLGSTT---- 512
           + +  +  M V+PCDV+ LAK ALSASK AVSL E+ K   ADL++S +PSLG+ +    
Sbjct: 138 ITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNL 197

Query: 513 PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQRSKSKASDPDDPLRLFSW 692
           P+E E+ VRSTRLLERRSKKRR P  KV V E   S+RA++QR  ++  DP DPLRLF W
Sbjct: 198 PLE-EKTVRSTRLLERRSKKRRNP--KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLW 254

Query: 693 VPETK 707
            PET+
Sbjct: 255 GPETR 259



 Score = 48.9 bits (115), Expect(2) = 3e-44
 Identities = 23/43 (53%), Positives = 35/43 (81%)
 Frame = +1

Query: 10  TTSDDLMLHEQAAPALSPVLTTSLAPQFPTSVLIQELRDDFKP 138
           ++S  LMLH+Q APA++ + TT +A +FPTSVL+QE RD+++P
Sbjct: 23  SSSSVLMLHDQVAPAVASIPTT-IARKFPTSVLLQEQRDEYRP 64


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  155 bits (393), Expect(2) = 7e-44
 Identities = 96/185 (51%), Positives = 122/185 (65%), Gaps = 5/185 (2%)
 Frame = +3

Query: 168 LDGKHMETGFSAHEENDPVDSEKYLQEFQRQLLHWRGLWYLSPSLQMG-RIPSLSSTKQS 344
           L+ + ME   SA EEN   D  +Y+  F+RQLL   GLWY  PS Q G + P  SS  +S
Sbjct: 90  LEKRQMEIVVSADEENSD-DHNQYMVNFERQLLLQPGLWYSLPSSQTGEKSPFSSSIMKS 148

Query: 345 LASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLDESLAPSLGSTT---- 512
           + +  +  M V+PCDV+ LAK ALSASK AVSL E+ K   ADL++S +PSLG+ +    
Sbjct: 149 ITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAKLLGADLEDSPSPSLGAISSPNL 208

Query: 513 PVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQRSKSKASDPDDPLRLFSW 692
           P+E E+ VRSTRLLERRSKKRR P  KV V E   S+RA++QR  ++  DP DPLRLF W
Sbjct: 209 PLE-EKTVRSTRLLERRSKKRRNP--KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLW 265

Query: 693 VPETK 707
            PET+
Sbjct: 266 GPETR 270



 Score = 47.8 bits (112), Expect(2) = 7e-44
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = +1

Query: 25  LMLHEQAAPALSPVLTTSLAPQFPTSVLIQELRDDFKP 138
           LMLH+Q APA++ + TT +A +FPTSVL+QE RD+++P
Sbjct: 39  LMLHDQVAPAVASIPTT-IARKFPTSVLLQEQRDEYRP 75


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  122 bits (307), Expect(2) = 8e-37
 Identities = 77/190 (40%), Positives = 104/190 (54%)
 Frame = +3

Query: 138 FVAHKQNSPVLDGKHMETGFSAHEENDPVDSEKYLQEFQRQLLHWRGLWYLSPSLQMGRI 317
           F   + +   LD +  E G S HE  D  + ++ ++ F+ QL HW   W L         
Sbjct: 71  FKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWNL--------- 121

Query: 318 PSLSSTKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLDESLAPS 497
                        T  L+ VEP +V+ LAK ALSASKHA  LA+++     DLD +LA +
Sbjct: 122 -------------TDKLIDVEPTNVINLAKRALSASKHAAFLADNN----TDLD-NLAST 163

Query: 498 LGSTTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQRSKSKASDPDDPL 677
             S+  +E+ +IVRS R L R+S  RR PK K L+ ET  SK AD+Q+  S+  DP+DPL
Sbjct: 164 SSSSFSLEEVKIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADIQKRLSQGFDPNDPL 223

Query: 678 RLFSWVPETK 707
           RLF W PETK
Sbjct: 224 RLFLWGPETK 233



 Score = 57.4 bits (137), Expect(2) = 8e-37
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +1

Query: 13  TSDDLMLHEQAAPALSPVLTTSLAPQFPTSVLIQELRDDFKPLLHINK 156
           TS  L+L EQA PA+S + TTS A  FPTSVL+QE RD+F+PL +I K
Sbjct: 25  TSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQRDEFRPLQNIFK 72


>ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 571

 Score =  112 bits (280), Expect(2) = 4e-32
 Identities = 74/193 (38%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
 Frame = +3

Query: 150 KQNSPVLDGKHMETGFSAHEENDPVDSEKYLQEFQRQLLHWRGLWYLSPSLQMGRIPSLS 329
           K +  +L  + M+T  + HEEN+  ++++ + +F++ L HW  L   S   Q+G + + S
Sbjct: 81  KTSQAMLSTRQMDT-VTVHEENNTENADQVVLDFRKHLHHWPNLQLTSS--QIGEVAASS 137

Query: 330 STKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEAD-LDESLAPSLGS 506
           + +       +   GV+  + V+LAK ALS SK   S+ ED KS +AD +  SLA +  +
Sbjct: 138 TLEHVSVDLERRPNGVQ-FNGVSLAKKALSTSKQESSVVEDLKSIKADDVPFSLASTSLA 196

Query: 507 TTPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRADLQ------RSKSKASDPD 668
              + + + VRSTRLLERRSK+R+VPK KV+  ET  +++ D Q      + K++  D D
Sbjct: 197 DPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAQEKLRAEKKKNEELDQD 256

Query: 669 DPLRLFSWVPETK 707
           DPLRLF W PETK
Sbjct: 257 DPLRLFLWGPETK 269



 Score = 52.0 bits (123), Expect(2) = 4e-32
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +1

Query: 10  TTSDDLMLHEQAAPALSPVLTTSLAPQFPTSVLIQELRDDFKPLLHINK 156
           +TS  LMLHEQA+P ++   +   A  FP SVL+ E RD+++PLLH++K
Sbjct: 30  STSSVLMLHEQASPTVASWSSNFSAQNFPASVLLPEQRDEYRPLLHMSK 78


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor rpoD [Glycine max]
          Length = 574

 Score =  109 bits (273), Expect(2) = 9e-31
 Identities = 74/196 (37%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
 Frame = +3

Query: 150 KQNSPVLDGKHMETGFSAHEENDPVDSEKYLQEFQRQLLHWRGLWYLSPSLQMGRIPSLS 329
           K +  +L  + M+T    HEEN+  ++++ + +F++ L +W  L  L  S Q G I + S
Sbjct: 80  KTSQAMLSTRQMDT-VMVHEENNTENADQVVLDFRKHLHYWPHLQNLLASSQTGEISASS 138

Query: 330 STKQSLASKTKTLMGVEPCDVVTLAKIALSASKHAVSLAEDHKSFEADLDESLAPSLGST 509
           + +Q  +   +   GV+ C+ V+LAK ALS SK   S+ ED KS +AD D+S+   L ST
Sbjct: 139 TLQQVSSDLDRHTNGVQ-CNRVSLAKKALSTSKQGSSVVEDLKSIKAD-DDSIPFGLAST 196

Query: 510 ----TPVEQERIVRSTRLLERRSKKRRVPKQKVLVQETSSSKRAD------LQRSKSKAS 659
                 + + + VRSTRLLERRSK+R+VPK KV+  ET  +++ D      +++ K++  
Sbjct: 197 GLADPSIGRNKTVRSTRLLERRSKQRKVPKSKVIDDETYLARKDDAHEKLRVEKKKNEEL 256

Query: 660 DPDDPLRLFSWVPETK 707
           D +DPL  F   PETK
Sbjct: 257 DQNDPLCFFLRGPETK 272



 Score = 50.1 bits (118), Expect(2) = 9e-31
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = +1

Query: 4   LETTSDDLMLHEQAAPALSPVLTTSLAPQFPTSVLIQELRDDFKPLLHINK 156
           L +++  LML EQA+P ++   +   A  FP SVL+QE RD+++PLLH++K
Sbjct: 27  LSSSTSVLMLREQASPTVASWSSNFSAQNFPASVLLQEQRDEYRPLLHMSK 77