BLASTX nr result

ID: Panax21_contig00027087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027087
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263...   145   1e-32
ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_002337359.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...   135   1e-29
ref|XP_002531750.1| conserved hypothetical protein [Ricinus comm...   134   2e-29

>ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera]
          Length = 171

 Score =  145 bits (367), Expect = 1e-32
 Identities = 91/153 (59%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
 Frame = -2

Query: 709 MRTGVTLNLASXXXXXXXXXXXTFSPPATIIQRSPWHSPVPYLFGGLAAMLGLIAFSLLI 530
           MRTG T N  +             + PAT+ QRSPWHSPVPYLFGGLAAMLGLIAF+LLI
Sbjct: 1   MRTGATFNATA-------------ASPATV-QRSPWHSPVPYLFGGLAAMLGLIAFALLI 46

Query: 529 LACSYWKLS-GSRAAGED--QRDLEAGDEKPDNSAVKSFSTVLEEKIVVIMAGDVKPTFL 359
           LACSYW+ S G    GE   +RDLE+GD+     A K    V EEKIVVIMAGD KP FL
Sbjct: 47  LACSYWRFSNGHLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFL 106

Query: 358 ATPMSSKASCSFGDAAGKSLNTEEGKQFGTVEK 260
           ATPMSS+AS SFGD  GKS + EE K+    EK
Sbjct: 107 ATPMSSRAS-SFGDNNGKS-DGEEKKEQEKAEK 137


>ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|222855673|gb|EEE93220.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  137 bits (346), Expect = 3e-30
 Identities = 71/107 (66%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
 Frame = -2

Query: 637 SPPATIIQRSPWHSPVPYLFGGLAAMLGLIAFSLLILACSYWKLSG---SRAAGEDQRDL 467
           +PPA    RSPWHSPVPYLFGGLAAMLGLIAF+LLILACSYW+LS    S   G DQRDL
Sbjct: 19  TPPAIAQPRSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSRLDSENEGNDQRDL 78

Query: 466 EAGDEKPDNSAVKSFSTVLEEKIVVIMAGDVKPTFLATPMSSKASCS 326
           E+G+EK  ++  K+   V EEK +VIMAG+ KPTFLATP+ SK S S
Sbjct: 79  ESGNEKEGSNPGKAEKRVYEEKFLVIMAGNQKPTFLATPVCSKVSSS 125


>ref|XP_002337359.1| predicted protein [Populus trichocarpa] gi|222838907|gb|EEE77258.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  137 bits (346), Expect = 3e-30
 Identities = 71/107 (66%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
 Frame = -2

Query: 637 SPPATIIQRSPWHSPVPYLFGGLAAMLGLIAFSLLILACSYWKLSG---SRAAGEDQRDL 467
           +PPA    RSPWHSPVPYLFGGLAAMLGLIAF+LLILACSYW+LS    S   G DQRDL
Sbjct: 9   TPPAIAQPRSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSRLDSENEGNDQRDL 68

Query: 466 EAGDEKPDNSAVKSFSTVLEEKIVVIMAGDVKPTFLATPMSSKASCS 326
           E+G+EK  ++  K+   V EEK +VIMAG+ KPTFLATP+ SK S S
Sbjct: 69  ESGNEKEGSNPGKAEKRVYEEKFLVIMAGNQKPTFLATPVCSKVSSS 115


>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score =  135 bits (340), Expect = 1e-29
 Identities = 84/152 (55%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
 Frame = -2

Query: 706 RTGVTLNLASXXXXXXXXXXXTFSPPATIIQRSPWHSPVPYLFGGLAAMLGLIAFSLLIL 527
           RTG TLN  +             +P A++   SPWHSPVPYLFGGLAAMLGLIAF+LLIL
Sbjct: 3   RTGGTLNATAA------------TPAASVQPHSPWHSPVPYLFGGLAAMLGLIAFALLIL 50

Query: 526 ACSYWKLSGSRAAGEDQ--RDLEAGDEKPDNSAVKSFSTVLEEKIVVIMAGDVKPTFLAT 353
           ACSYWKLSG     +D   RD EAGD      AVK      EEKI+VIMAGDVKPT+LAT
Sbjct: 51  ACSYWKLSGYLEGDDDSVARDAEAGD-GAGGDAVKP-PMAFEEKILVIMAGDVKPTYLAT 108

Query: 352 PMSSKASCSFGDAAGKSLNTEEGKQFGTVEKP 257
           PMSS+AS SFG+ +  +    E K     E P
Sbjct: 109 PMSSRAS-SFGERSSNNSEMTE-KSEAVAESP 138


>ref|XP_002531750.1| conserved hypothetical protein [Ricinus communis]
           gi|223528620|gb|EEF30639.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  134 bits (338), Expect = 2e-29
 Identities = 74/115 (64%), Positives = 85/115 (73%), Gaps = 3/115 (2%)
 Frame = -2

Query: 616 QRSPWHSPVPYLFGGLAAMLGLIAFSLLILACSYWKLSGSRAAGED--QRDLEA-GDEKP 446
           Q SPWHSPVPYLFGGLAAMLGLIAF+L+ILACSYWKLSG    G +  +RDLEA G E  
Sbjct: 15  QHSPWHSPVPYLFGGLAAMLGLIAFALVILACSYWKLSGYLENGNEGGERDLEAGGGEGG 74

Query: 445 DNSAVKSFSTVLEEKIVVIMAGDVKPTFLATPMSSKASCSFGDAAGKSLNTEEGK 281
           DN+  +    V EEK +VIMAG+VKPTFLATPMSS++S SFGD    S   +  K
Sbjct: 75  DNNEKQRQGVVFEEKFLVIMAGEVKPTFLATPMSSRSS-SFGDTKSCSCGEKSEK 128


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