BLASTX nr result

ID: Panax21_contig00027076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027076
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN96317.1| class 1 chitinase [Panax ginseng]                      135   3e-30
ref|XP_002312923.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
gb|AEZ67300.1| chitinase 1 [Populus x canadensis]                      91   1e-16
gb|ACP43629.2| chitinase [Musa AB Group] gi|296784834|gb|ADH1017...    90   2e-16
emb|CAC81812.1| putative chitinase [Musa acuminata]                    90   2e-16

>gb|ACN96317.1| class 1 chitinase [Panax ginseng]
          Length = 323

 Score =  135 bits (340), Expect = 3e-30
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = +3

Query: 201 WTVTIFILASSLAVSAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYCTNCQSQCGGPSP 377
           WTVTIFILASSLAVSAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYCTNCQSQCGGPSP
Sbjct: 4   WTVTIFILASSLAVSAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYCTNCQSQCGGPSP 62


>ref|XP_002312923.1| predicted protein [Populus trichocarpa] gi|222849331|gb|EEE86878.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/61 (70%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
 Frame = +3

Query: 201 WTVTIFILASSLAV--SAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYCTN-CQSQCGGP 371
           W  T+F L  SL +  SAEQCG QAG ALCP GLCCSQFGWCGST +YC N CQSQCGG 
Sbjct: 4   WVFTVFSLLLSLLLGGSAEQCGSQAGGALCPGGLCCSQFGWCGSTNDYCGNGCQSQCGGA 63

Query: 372 S 374
           S
Sbjct: 64  S 64


>gb|AEZ67300.1| chitinase 1 [Populus x canadensis]
          Length = 318

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/59 (71%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
 Frame = +3

Query: 201 WTVTIFILASSLAV--SAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYC-TNCQSQCGG 368
           W  T+F L  SL +  SAEQCG QAG ALCP GLCCSQFGWCGST +YC T CQSQCGG
Sbjct: 4   WAFTVFSLLLSLLLGGSAEQCGSQAGGALCPGGLCCSQFGWCGSTNDYCGTGCQSQCGG 62


>gb|ACP43629.2| chitinase [Musa AB Group] gi|296784834|gb|ADH10170.2| chitinase
           [Musa AB Group]
          Length = 307

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/57 (70%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
 Frame = +3

Query: 207 VTIFILASSLAVSAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYC-TNCQSQCGGPS 374
           + IF LASSL   AEQCG+QAG ALCP GLCCSQ+GWCG+T  YC   CQSQCGG S
Sbjct: 6   LVIFTLASSLGAFAEQCGRQAGGALCPGGLCCSQYGWCGNTDPYCGEGCQSQCGGSS 62


>emb|CAC81812.1| putative chitinase [Musa acuminata]
          Length = 317

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/53 (75%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
 Frame = +3

Query: 213 IFILASSLAVSAEQCGKQAGMALCPNGLCCSQFGWCGSTPEYC-TNCQSQCGG 368
           IF LASSL   AEQCG+QAG ALCP GLCCSQFGWCG+T  YC  +CQSQCGG
Sbjct: 12  IFTLASSLGAFAEQCGRQAGGALCPGGLCCSQFGWCGNTDPYCGKDCQSQCGG 64


Top