BLASTX nr result

ID: Panax21_contig00027062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027062
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26901.3| unnamed protein product [Vitis vinifera]              100   2e-18
emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera]    97   2e-17
ref|XP_002526024.1| hypothetical protein RCOM_0843390 [Ricinus c...    85   7e-14
ref|XP_002871359.1| histone H1/H5 family protein [Arabidopsis ly...    81   1e-12
gb|AEL98675.1| winged-helix DNA-binding transcription factor fam...    78   6e-12

>emb|CBI26901.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 70/217 (32%), Positives = 111/217 (51%), Gaps = 18/217 (8%)
 Frame = -1

Query: 1613 MDKVRDVIMKLS--ENSSP---KQKSFIEEQLTKFLADFNSHDHPPYAAMIHRALQELNE 1449
            MDK++  ++     ++++P   + K  IE++L +      + DHPPYA MI  A++ L E
Sbjct: 1    MDKLKKAVLGAMTLDSATPLSEETKKCIEKRLLQLFPVIRTPDHPPYAWMILDAIKTLKE 60

Query: 1448 KGGSTEESISKYIKNQYADLPWAHNSLLKHHLGNLCDSGEISVTRKKYYLFADANPILDC 1269
            K GS+E+S+S++IK+ Y ++PWAH+S L HHL  L  +G+I VT   +Y+    NP    
Sbjct: 61   KRGSSEKSLSEFIKSNY-EVPWAHSSYLSHHLCKLAQNGDIVVTSDDHYMIPTGNP---N 116

Query: 1268 PIRPKKGHLKRKQKGESRRG-------------QGRQFKKNEAEVCDKQKEEHCEVIGEH 1128
            P R +K   +++ +G  RRG              G Q K    E+   QK E+  + G +
Sbjct: 117  PKRKEKQQKRKRHQGRGRRGIYDKEAVVEKKNQLGEQEKVVIKELSQAQKHENYVIDGAN 176

Query: 1127 SKCNIEQDKFKGERKDIKEHKVDMVGEHNQVRKLLYE 1017
                 EQD        + E K    G+ N+VR  L +
Sbjct: 177  -----EQD------YQVNEGKNQSQGQQNEVRSELLQ 202


>emb|CAN79049.1| hypothetical protein VITISV_004868 [Vitis vinifera]
          Length = 444

 Score = 96.7 bits (239), Expect = 2e-17
 Identities = 69/217 (31%), Positives = 110/217 (50%), Gaps = 18/217 (8%)
 Frame = -1

Query: 1613 MDKVRDVIMKLS--ENSSP---KQKSFIEEQLTKFLADFNSHDHPPYAAMIHRALQELNE 1449
            MDK++  ++     ++++P   + K  IE++L +      + DHPPYA MI  A++ L E
Sbjct: 23   MDKLKKAVLGAMTLDSATPLSEETKKCIEKRLLQLFPVIRTPDHPPYAWMILDAIKTLKE 82

Query: 1448 KGGSTEESISKYIKNQYADLPWAHNSLLKHHLGNLCDSGEISVTRKKYYLFADANPILDC 1269
            K GS+E+S+S++IK+   ++PWAH+S L HHL  L  +G+I VT   +Y+    NP    
Sbjct: 83   KRGSSEKSLSEFIKSN-XEVPWAHSSYLSHHLCKLAQNGDIVVTSDDHYMIPTGNP---N 138

Query: 1268 PIRPKKGHLKRKQKGESRRG-------------QGRQFKKNEAEVCDKQKEEHCEVIGEH 1128
            P R +K   +++ +G  RRG              G Q K    E+   QK E+  + G +
Sbjct: 139  PKRKEKQQKRKRHQGRGRRGIYDKEAVVEKKNQLGEQEKVVIKELSQAQKHENYVIDGAN 198

Query: 1127 SKCNIEQDKFKGERKDIKEHKVDMVGEHNQVRKLLYE 1017
                 EQD        + E K    G+ N+VR  L +
Sbjct: 199  -----EQD------YQVNEGKNQSQGQQNEVRSELLQ 224


>ref|XP_002526024.1| hypothetical protein RCOM_0843390 [Ricinus communis]
            gi|223534671|gb|EEF36364.1| hypothetical protein
            RCOM_0843390 [Ricinus communis]
          Length = 640

 Score = 84.7 bits (208), Expect = 7e-14
 Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
 Frame = -1

Query: 1613 MDKVRDVIMK--LSENSS----PKQKSFIEEQLTKFLADFNSHDHPPYAAMIHRALQELN 1452
            M K++D++ K  ++ N S    PK KS IE++L +   +F +  HPPYA MI +A+ ELN
Sbjct: 155  MAKLKDLVFKNHVATNPSISNVPKFKSHIEQRLQELFHNFYTPTHPPYAYMIQKAILELN 214

Query: 1451 EKGGSTEESISKYIKNQYADLPWAHNSLLKHHLGNLC 1341
            +KG   EE IS +IK ++ DLP+ H S L+HHL  +C
Sbjct: 215  QKGRLCEEEISAFIKRKFKDLPFGHESFLRHHLEKIC 251



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 39/116 (33%), Positives = 63/116 (54%)
 Frame = -1

Query: 1481 MIHRALQELNEKGGSTEESISKYIKNQYADLPWAHNSLLKHHLGNLCDSGEISVTRKKYY 1302
            MI RA+ E+NE+ GST+E+IS ++K +Y +LPW H S L HHL  LC +  I       Y
Sbjct: 1    MIERAISEMNEEKGSTKEAISAFLKREYKNLPWGHESFLGHHLRKLCVNRYIKCVNNGNY 60

Query: 1301 LFADANPILDCPIRPKKGHLKRKQKGESRRGQGRQFKKNEAEVCDKQKEEHCEVIG 1134
            +      + DC +    G  K++Q    +RG+    K+   +  +K+++   + IG
Sbjct: 61   VLM----VKDCNVSEITGSTKKRQARRGKRGR----KQGRVKKMEKKRKPVRQEIG 108


>ref|XP_002871359.1| histone H1/H5 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317196|gb|EFH47618.1| histone H1/H5 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 460

 Score = 80.9 bits (198), Expect = 1e-12
 Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 11/262 (4%)
 Frame = -1

Query: 1613 MDKVRDVIMKLSEN---SSPKQKSFIEEQLTKFLADFNSHDHPPYAAMIHRALQELNEKG 1443
            ++ +R  ++ L+++   S P+ K F ++ L   L+   + DHP Y+AMI  A+ +LNE+G
Sbjct: 16   VENLRGFMVNLAKSRGFSLPETKRFQQKFLDLCLS--RTPDHPTYSAMIFIAIMDLNEEG 73

Query: 1442 GSTEESISKYIKNQYADLPWAHNSLLKHHLGNLCDSGEISVTRKKY-YLFADANPILDCP 1266
            G++E+ IS++IK++Y +LP+AH SLL HHL  L +  EI      Y Y        +   
Sbjct: 74   GASEDVISEFIKSKYKNLPFAHKSLLSHHLAKLVEKREILCDCNSYCYSLPGEKKTVAST 133

Query: 1265 IRPKKGHLKRKQKGESRRGQGRQFKKNEAEVCD--KQKEEHCEVIGEHSKCNIEQDKFKG 1092
               +K  +   +K + R        +NE E  +  K  +   +++ E S   + + +   
Sbjct: 134  DDERKSAVITVRKNDKRVANEVMTCQNEEESVEILKSGDRKVDLLEEQS---LTKSRTSS 190

Query: 1091 ERKDIKEHKVDMV--GEHNQVRKLLYEVTEELIESD---EQHHEVIGSEAYDQRIEVTRD 927
            +RK     KV  V   E N V+  L + T      +   E+    +G+   + RIEV   
Sbjct: 191  KRKACCAIKVIEVRHTEDNGVKADLRDSTIHTPRKEGVAEEPGVAVGNSETEARIEVNSR 250

Query: 926  GGHELRDGRIEGQSQPLSRDVG 861
            GG       +  Q+  L+ + G
Sbjct: 251  GGELYEVAVLYKQNDVLTDESG 272


>gb|AEL98675.1| winged-helix DNA-binding transcription factor family protein, partial
            [Silene latifolia]
          Length = 247

 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 20/225 (8%)
 Frame = -1

Query: 1613 MDKVRDVIMKLSENS-----SPKQKSFIEEQLTKFLADFN-SHDHPPYAAMIHRALQELN 1452
            MDK+ + +  L  ++     +P Q   ++  L K  +D + +  HPPY+AMI  ++ +L+
Sbjct: 12   MDKLNNTLFDLLRSNPNYPFTPSQFPILQNALLKNFSDSDKTPTHPPYSAMIQASIVKLD 71

Query: 1451 -EKGGSTEESISKYIKNQYADLPWAHNSLLKHHLGNLCDSGEISVTRKKYYLFADANPIL 1275
             E+  +TE+ IS +I+  Y  LPWAH   LKHHL  LC  GE+        +F DA+   
Sbjct: 72   DERSLTTEKMISDHIRKNYQGLPWAHTRFLKHHLDKLCQGGEL--------IFDDADKTY 123

Query: 1274 DCPIRPKKGHLKR-----KQKGESRRGQGRQFKKNEAEVCDKQ---KEEHCEVIGEHSKC 1119
            + P + ++  L +     K KG     +G+       E+ D Q   +E+  + +G   + 
Sbjct: 124  NVPGKKRRKKLLKLKLCSKTKGNEVVQEGKVAPDEVTELSDSQIGIQEDGSKKLGRGKRR 183

Query: 1118 NIEQDKFKGERKDIKEHKVDMVGEHNQVRK-----LLYEVTEELI 999
                     E +D ++  VD  GE N+ ++     +L E   E++
Sbjct: 184  RRRSYISDDEDEDFEKMIVD--GEGNRDKESGKEMVLVETVNEML 226


Top