BLASTX nr result

ID: Panax21_contig00027043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027043
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317342.1| predicted protein [Populus trichocarpa] gi|2...    48   1e-10
ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm...    46   8e-08
gb|AFW82411.1| hypothetical protein ZEAMMB73_943067 [Zea mays]         40   5e-07
gb|EEE64238.1| hypothetical protein OsJ_19071 [Oryza sativa Japo...    39   8e-07
ref|NP_001055948.1| Os05g0498300 [Oryza sativa Japonica Group] g...    39   8e-07

>ref|XP_002317342.1| predicted protein [Populus trichocarpa] gi|222860407|gb|EEE97954.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 48.1 bits (113), Expect(2) = 1e-10
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -3

Query: 277 YTTLV-STVFAVQYLK*VGDTDGTSDYPTMKLMKSSIFCYEQAWHSLESLTI 125
           +T L+   ++     K   DTDGT++ P +KL+KSSIF YEQAWH L  L +
Sbjct: 93  FTCLIYELIYMWNVFKFQSDTDGTTEAPMVKLVKSSIFSYEQAWHRLIYLRV 144



 Score = 42.4 bits (98), Expect(2) = 1e-10
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -1

Query: 381 VKSQAKPQVIYTSTKSEESLLSALQQNGML 292
           VK QAKP  IYTSTK EES LSALQ++G L
Sbjct: 62  VKYQAKPLNIYTSTKCEESFLSALQRSGTL 91


>ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
           gi|223530590|gb|EEF32467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score = 46.2 bits (108), Expect(2) = 8e-08
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 220 TDGTSDYPTMKLMKSSIFCYEQAWHSLESLTI 125
           +DGT++ PT+KL+KSSIF YEQAWH L  L +
Sbjct: 78  SDGTTEAPTVKLVKSSIFSYEQAWHRLIYLRV 109



 Score = 35.0 bits (79), Expect(2) = 8e-08
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = -1

Query: 381 VKSQAKPQVIYTSTKSEESLLSALQQN 301
           VK QA+P  IY S+KSEES ++ALQ++
Sbjct: 52  VKYQAQPLTIYASSKSEESFINALQRS 78


>gb|AFW82411.1| hypothetical protein ZEAMMB73_943067 [Zea mays]
          Length = 118

 Score = 39.7 bits (91), Expect(2) = 5e-07
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -1

Query: 381 VKSQAKPQVIYTSTKSEESLLSALQQN 301
           VK Q+K   IYTSTK+EE+LLSALQ+N
Sbjct: 41  VKFQSKASTIYTSTKTEEALLSALQRN 67



 Score = 38.9 bits (89), Expect(2) = 5e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -3

Query: 217 DGTSDYPTMKLMKSSIFCYEQAWHSLESLTICCI 116
           DG  + P +KL KSS F YEQAWH L  L +  +
Sbjct: 68  DGNGEAPVVKLTKSSTFSYEQAWHILIYLKVAAM 101


>gb|EEE64238.1| hypothetical protein OsJ_19071 [Oryza sativa Japonica Group]
          Length = 1046

 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -1

Query: 381 VKSQAKPQVIYTSTKSEESLLSALQQN 301
           VK Q+KP  IYTSTK++E+LL ALQ+N
Sbjct: 297 VKYQSKPSTIYTSTKTDEALLLALQRN 323



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -3

Query: 217 DGTSDYPTMKLMKSSIFCYEQAWHSLESLTICCI 116
           D   + P +KLMKSS F YEQAWH L  L +  +
Sbjct: 324 DCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAM 357


>ref|NP_001055948.1| Os05g0498300 [Oryza sativa Japonica Group]
           gi|48475216|gb|AAT44285.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579499|dbj|BAF17862.1|
           Os05g0498300 [Oryza sativa Japonica Group]
          Length = 809

 Score = 39.3 bits (90), Expect(2) = 8e-07
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -1

Query: 381 VKSQAKPQVIYTSTKSEESLLSALQQN 301
           VK Q+KP  IYTSTK++E+LL ALQ+N
Sbjct: 60  VKYQSKPSTIYTSTKTDEALLLALQRN 86



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -3

Query: 217 DGTSDYPTMKLMKSSIFCYEQAWHSLESLTICCI 116
           D   + P +KLMKSS F YEQAWH L  L +  +
Sbjct: 87  DCNDEAPAVKLMKSSTFSYEQAWHRLMYLKVAAM 120


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