BLASTX nr result

ID: Panax21_contig00027021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027021
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69262.1| hypothetical protein VITISV_004031 [Vitis vinifera]   481   e-133
ref|XP_002273793.1| PREDICTED: protoporphyrinogen oxidase, chlor...   477   e-132
gb|AAC72870.1| Arabidopsis thaliana protoporphyrinogen oxidase p...   471   e-130
ref|NP_192078.1| protoporphyrinogen oxidase [Arabidopsis thalian...   471   e-130
ref|XP_002874964.1| hypothetical protein ARALYDRAFT_912062 [Arab...   469   e-130

>emb|CAN69262.1| hypothetical protein VITISV_004031 [Vitis vinifera]
          Length = 549

 Score =  481 bits (1238), Expect = e-133
 Identities = 236/285 (82%), Positives = 265/285 (92%)
 Frame = +2

Query: 2    AIQERKSTPKAPRDPRLPKPKGQTVGSFRKGLTMLPNAIAQRLGNKVKLSWKLSSIGKME 181
            AIQE+ +TPK PRDPRLPKPKGQTVGSF+KGL MLP AI++RLG KVKLSWKLSSI +++
Sbjct: 264  AIQEKNNTPKPPRDPRLPKPKGQTVGSFKKGLIMLPEAISKRLGGKVKLSWKLSSIIRLD 323

Query: 182  NGGYTLTYETPDGLVTLQSRTVVMTVPSHIASGLLRPISDAAAEALSKLYYPPVAAVSVS 361
            +GGY+LTYETP+GLV+LQSR+VVMTVPS +AS LL P+S  AA+ALSK YYPPVAAVS+S
Sbjct: 324  DGGYSLTYETPEGLVSLQSRSVVMTVPSRVASSLLHPLSAVAADALSKFYYPPVAAVSIS 383

Query: 362  YPKEAVRAECLIDGELKGFGQLIPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 541
            YPKEA+R ECLI+GELKGFGQL PRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT
Sbjct: 384  YPKEAIRTECLIEGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 443

Query: 542  NTGILSKTESQLVEAVDRDLRKMLINPSAKEALALGVRVWPQAIPQFLIGHLDMVDGAKA 721
            N GILSKTES+LVEAVDRDLRKMLINP+AK+ L LGVRVWPQAIPQFLIGHLD++D AK+
Sbjct: 444  NPGILSKTESELVEAVDRDLRKMLINPNAKDPLVLGVRVWPQAIPQFLIGHLDLLDAAKS 503

Query: 722  ALSNGGFQGMFLGGNYVSGVALGRCVEGAYEVAADVNNFLSQYLY 856
            AL +GGFQGMFLGGNYVSGVALGRCVEGAYEVAA+V +FLSQY+Y
Sbjct: 504  ALRDGGFQGMFLGGNYVSGVALGRCVEGAYEVAAEVADFLSQYVY 548


>ref|XP_002273793.1| PREDICTED: protoporphyrinogen oxidase, chloroplastic [Vitis vinifera]
            gi|297744080|emb|CBI37050.3| unnamed protein product
            [Vitis vinifera]
          Length = 549

 Score =  477 bits (1228), Expect = e-132
 Identities = 235/285 (82%), Positives = 264/285 (92%)
 Frame = +2

Query: 2    AIQERKSTPKAPRDPRLPKPKGQTVGSFRKGLTMLPNAIAQRLGNKVKLSWKLSSIGKME 181
            AIQE+ +TPK  RDPRLPKPKGQTVGSF+KGL MLP AI++RLG KVKLSWKLSSI +++
Sbjct: 264  AIQEKNNTPKPLRDPRLPKPKGQTVGSFKKGLIMLPEAISKRLGGKVKLSWKLSSIIRLD 323

Query: 182  NGGYTLTYETPDGLVTLQSRTVVMTVPSHIASGLLRPISDAAAEALSKLYYPPVAAVSVS 361
            +GGY+LTYETP+GLV+LQSR+VVMTVPS +AS LL P+S  AA+ALSK YYPPVAAVS+S
Sbjct: 324  DGGYSLTYETPEGLVSLQSRSVVMTVPSRVASSLLHPLSAVAADALSKFYYPPVAAVSIS 383

Query: 362  YPKEAVRAECLIDGELKGFGQLIPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 541
            YPKEA+R ECLI+GELKGFGQL PRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT
Sbjct: 384  YPKEAIRTECLIEGELKGFGQLHPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 443

Query: 542  NTGILSKTESQLVEAVDRDLRKMLINPSAKEALALGVRVWPQAIPQFLIGHLDMVDGAKA 721
            N GILSKTES+LVEAVDRDLRKMLINP+AK+ L LGVRVWPQAIPQFLIGHLD++D AK+
Sbjct: 444  NPGILSKTESELVEAVDRDLRKMLINPNAKDPLVLGVRVWPQAIPQFLIGHLDLLDAAKS 503

Query: 722  ALSNGGFQGMFLGGNYVSGVALGRCVEGAYEVAADVNNFLSQYLY 856
            AL +GGFQGMFLGGNYVSGVALGRCVEGAYEVAA+V +FLSQY+Y
Sbjct: 504  ALRDGGFQGMFLGGNYVSGVALGRCVEGAYEVAAEVADFLSQYVY 548


>gb|AAC72870.1| Arabidopsis thaliana protoporphyrinogen oxidase precursor (PPO)
            (SW:P55826) [Arabidopsis thaliana]
          Length = 545

 Score =  471 bits (1212), Expect = e-130
 Identities = 226/285 (79%), Positives = 263/285 (92%)
 Frame = +2

Query: 2    AIQERKSTPKAPRDPRLPKPKGQTVGSFRKGLTMLPNAIAQRLGNKVKLSWKLSSIGKME 181
            AIQERK+ PKA RDPRLPKP+GQTVGSFRKGL MLP AI+ RLG+KVKLSWKLS I K+E
Sbjct: 260  AIQERKNAPKAERDPRLPKPQGQTVGSFRKGLRMLPEAISARLGSKVKLSWKLSGITKLE 319

Query: 182  NGGYTLTYETPDGLVTLQSRTVVMTVPSHIASGLLRPISDAAAEALSKLYYPPVAAVSVS 361
            +GGY LTYETPDGLV++QS++VVMTVPSH+ASGLLRP+S++AA ALSKLYYPPVAAVS+S
Sbjct: 320  SGGYNLTYETPDGLVSVQSKSVVMTVPSHVASGLLRPLSESAANALSKLYYPPVAAVSIS 379

Query: 362  YPKEAVRAECLIDGELKGFGQLIPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 541
            YPKEA+R ECLIDGELKGFGQL PR+QGVETLGTIYSSSLFPNRAPPGRILLLNYIGG+T
Sbjct: 380  YPKEAIRTECLIDGELKGFGQLHPRTQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGST 439

Query: 542  NTGILSKTESQLVEAVDRDLRKMLINPSAKEALALGVRVWPQAIPQFLIGHLDMVDGAKA 721
            NTGILSK+E +LVEAVDRDLRKMLI P++ + L LGVRVWPQAIPQFL+GH D++D AK+
Sbjct: 440  NTGILSKSEGELVEAVDRDLRKMLIKPNSTDPLKLGVRVWPQAIPQFLVGHFDILDTAKS 499

Query: 722  ALSNGGFQGMFLGGNYVSGVALGRCVEGAYEVAADVNNFLSQYLY 856
            +L++ G++G+FLGGNYV+GVALGRCVEGAYE A +VNNF+S+Y Y
Sbjct: 500  SLTSSGYEGLFLGGNYVAGVALGRCVEGAYETAIEVNNFMSRYAY 544


>ref|NP_192078.1| protoporphyrinogen oxidase [Arabidopsis thaliana]
            gi|2495184|sp|P55826.1|PPOC_ARATH RecName:
            Full=Protoporphyrinogen oxidase, chloroplastic;
            Short=PPO; Flags: Precursor gi|1877018|dbj|BAA11820.1|
            protoporphyrinogen oxidase [Arabidopsis thaliana]
            gi|7268212|emb|CAB77739.1| protoporphyrinogen oxidase
            [Arabidopsis thaliana] gi|56550711|gb|AAV97809.1|
            At4g01690 [Arabidopsis thaliana]
            gi|58331767|gb|AAW70381.1| At4g01690 [Arabidopsis
            thaliana] gi|332656665|gb|AEE82065.1| protoporphyrinogen
            oxidase [Arabidopsis thaliana]
          Length = 537

 Score =  471 bits (1212), Expect = e-130
 Identities = 226/285 (79%), Positives = 263/285 (92%)
 Frame = +2

Query: 2    AIQERKSTPKAPRDPRLPKPKGQTVGSFRKGLTMLPNAIAQRLGNKVKLSWKLSSIGKME 181
            AIQERK+ PKA RDPRLPKP+GQTVGSFRKGL MLP AI+ RLG+KVKLSWKLS I K+E
Sbjct: 252  AIQERKNAPKAERDPRLPKPQGQTVGSFRKGLRMLPEAISARLGSKVKLSWKLSGITKLE 311

Query: 182  NGGYTLTYETPDGLVTLQSRTVVMTVPSHIASGLLRPISDAAAEALSKLYYPPVAAVSVS 361
            +GGY LTYETPDGLV++QS++VVMTVPSH+ASGLLRP+S++AA ALSKLYYPPVAAVS+S
Sbjct: 312  SGGYNLTYETPDGLVSVQSKSVVMTVPSHVASGLLRPLSESAANALSKLYYPPVAAVSIS 371

Query: 362  YPKEAVRAECLIDGELKGFGQLIPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 541
            YPKEA+R ECLIDGELKGFGQL PR+QGVETLGTIYSSSLFPNRAPPGRILLLNYIGG+T
Sbjct: 372  YPKEAIRTECLIDGELKGFGQLHPRTQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGST 431

Query: 542  NTGILSKTESQLVEAVDRDLRKMLINPSAKEALALGVRVWPQAIPQFLIGHLDMVDGAKA 721
            NTGILSK+E +LVEAVDRDLRKMLI P++ + L LGVRVWPQAIPQFL+GH D++D AK+
Sbjct: 432  NTGILSKSEGELVEAVDRDLRKMLIKPNSTDPLKLGVRVWPQAIPQFLVGHFDILDTAKS 491

Query: 722  ALSNGGFQGMFLGGNYVSGVALGRCVEGAYEVAADVNNFLSQYLY 856
            +L++ G++G+FLGGNYV+GVALGRCVEGAYE A +VNNF+S+Y Y
Sbjct: 492  SLTSSGYEGLFLGGNYVAGVALGRCVEGAYETAIEVNNFMSRYAY 536


>ref|XP_002874964.1| hypothetical protein ARALYDRAFT_912062 [Arabidopsis lyrata subsp.
            lyrata] gi|297320801|gb|EFH51223.1| hypothetical protein
            ARALYDRAFT_912062 [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score =  469 bits (1208), Expect = e-130
 Identities = 225/285 (78%), Positives = 263/285 (92%)
 Frame = +2

Query: 2    AIQERKSTPKAPRDPRLPKPKGQTVGSFRKGLTMLPNAIAQRLGNKVKLSWKLSSIGKME 181
            AIQERK+ PKA RDPRLPKPKGQTVGSFRKGL MLP AI+ RLG+KVKLSWKLS I K++
Sbjct: 252  AIQERKNAPKAERDPRLPKPKGQTVGSFRKGLRMLPEAISARLGSKVKLSWKLSGITKLD 311

Query: 182  NGGYTLTYETPDGLVTLQSRTVVMTVPSHIASGLLRPISDAAAEALSKLYYPPVAAVSVS 361
            +GGY LTYETPDG+V++QS++VVMTVPSH+ASGLLRP+S++AA ALSKLYYPPVAAVSVS
Sbjct: 312  SGGYNLTYETPDGVVSVQSKSVVMTVPSHVASGLLRPLSESAANALSKLYYPPVAAVSVS 371

Query: 362  YPKEAVRAECLIDGELKGFGQLIPRSQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGAT 541
            YP+EA+R ECLIDGELKGFGQL PR+QGVETLGTIYSSSLFPNRAPPGRILLLNYIGG+T
Sbjct: 372  YPEEAIRTECLIDGELKGFGQLHPRTQGVETLGTIYSSSLFPNRAPPGRILLLNYIGGST 431

Query: 542  NTGILSKTESQLVEAVDRDLRKMLINPSAKEALALGVRVWPQAIPQFLIGHLDMVDGAKA 721
            NTGILSK+E +LVEAVDRDLRKMLI P++ + L LGVRVWPQAIPQFL+GH D++D AK+
Sbjct: 432  NTGILSKSEGELVEAVDRDLRKMLIKPNSADPLKLGVRVWPQAIPQFLVGHFDILDTAKS 491

Query: 722  ALSNGGFQGMFLGGNYVSGVALGRCVEGAYEVAADVNNFLSQYLY 856
            +L++ G++G+FLGGNYV+GVALGRCVEGAYE A +VNNF+S+Y Y
Sbjct: 492  SLTSSGYEGLFLGGNYVAGVALGRCVEGAYETATEVNNFMSRYAY 536


Top