BLASTX nr result

ID: Panax21_contig00027010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027010
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40602.1| unknown [Lotus japonicus]                               92   4e-17
ref|XP_003547537.1| PREDICTED: probable importin subunit beta-4-...    92   4e-17
ref|XP_002267673.1| PREDICTED: probable importin subunit beta-4 ...    91   7e-17
emb|CAN76102.1| hypothetical protein VITISV_007422 [Vitis vinifera]    91   7e-17
ref|XP_003532985.1| PREDICTED: probable importin subunit beta-4-...    91   1e-16

>gb|AFK40602.1| unknown [Lotus japonicus]
          Length = 328

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/65 (70%), Positives = 48/65 (73%)
 Frame = +3

Query: 210 LRGLYPLFGESEPDDAVRDNATCMVARMIMVHPESVPLNQXXXXXXXXXXXXEYHEESMT 389
           LRGL+PLFGESEPDDAVRDNA   VARMIMVHPES+PLNQ            E HEESM 
Sbjct: 188 LRGLHPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVVPVFLRVLPLKEDHEESMA 247

Query: 390 VYSCV 404
           VYSCV
Sbjct: 248 VYSCV 252


>ref|XP_003547537.1| PREDICTED: probable importin subunit beta-4-like [Glycine max]
          Length = 1048

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/65 (70%), Positives = 48/65 (73%)
 Frame = +3

Query: 210  LRGLYPLFGESEPDDAVRDNATCMVARMIMVHPESVPLNQXXXXXXXXXXXXEYHEESMT 389
            LRGL+PLFGESEPDDAVRDNA   VARMIMVHPES+PLNQ            E HEESM 
Sbjct: 908  LRGLHPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVLPVFLRVLPLKEDHEESMA 967

Query: 390  VYSCV 404
            VYSCV
Sbjct: 968  VYSCV 972


>ref|XP_002267673.1| PREDICTED: probable importin subunit beta-4 [Vitis vinifera]
            gi|298204504|emb|CBI23779.3| unnamed protein product
            [Vitis vinifera]
          Length = 1048

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/67 (65%), Positives = 49/67 (73%)
 Frame = +3

Query: 210  LRGLYPLFGESEPDDAVRDNATCMVARMIMVHPESVPLNQXXXXXXXXXXXXEYHEESMT 389
            LRGLYPLFGESEPDDAVRDNA   VARMIMVHPE++PLNQ            E  EES+ 
Sbjct: 908  LRGLYPLFGESEPDDAVRDNAAGAVARMIMVHPEAIPLNQVLPVFLKVLPLKEDREESIA 967

Query: 390  VYSCVCN 410
            V++CVCN
Sbjct: 968  VFTCVCN 974


>emb|CAN76102.1| hypothetical protein VITISV_007422 [Vitis vinifera]
          Length = 1028

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/67 (65%), Positives = 49/67 (73%)
 Frame = +3

Query: 210  LRGLYPLFGESEPDDAVRDNATCMVARMIMVHPESVPLNQXXXXXXXXXXXXEYHEESMT 389
            LRGLYPLFGESEPDDAVRDNA   VARMIMVHPE++PLNQ            E  EES+ 
Sbjct: 888  LRGLYPLFGESEPDDAVRDNAAGAVARMIMVHPEAIPLNQVLPVFLKVLPLKEDREESIA 947

Query: 390  VYSCVCN 410
            V++CVCN
Sbjct: 948  VFTCVCN 954


>ref|XP_003532985.1| PREDICTED: probable importin subunit beta-4-like [Glycine max]
          Length = 1048

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/65 (70%), Positives = 47/65 (72%)
 Frame = +3

Query: 210  LRGLYPLFGESEPDDAVRDNATCMVARMIMVHPESVPLNQXXXXXXXXXXXXEYHEESMT 389
            LRGLYPLFGESEPDDAVRDNA   VARMIMVHPES+PLNQ            E  EESM 
Sbjct: 908  LRGLYPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVLPVFLRVLPLKEDREESMA 967

Query: 390  VYSCV 404
            VYSCV
Sbjct: 968  VYSCV 972


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