BLASTX nr result

ID: Panax21_contig00027000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00027000
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534679.1| conserved hypothetical protein [Ricinus comm...    66   2e-24
ref|XP_002514475.1| conserved hypothetical protein [Ricinus comm...    68   3e-18
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    79   1e-16
ref|XP_002528720.1| conserved hypothetical protein [Ricinus comm...    57   6e-11
ref|XP_002525524.1| conserved hypothetical protein [Ricinus comm...    66   1e-08

>ref|XP_002534679.1| conserved hypothetical protein [Ricinus communis]
           gi|223524777|gb|EEF27704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 272

 Score = 65.9 bits (159), Expect(3) = 2e-24
 Identities = 34/57 (59%), Positives = 38/57 (66%)
 Frame = -2

Query: 649 NQRWESRSTIEILKFHGSLQTTEFLD*LHTVEELLDFKEVPNPHHVQLITMRLRGRA 479
           N+RWES    EIL+FHGSLQ  E LD L  VEE+LDFK VP    V L+  RLR RA
Sbjct: 48  NRRWESGMRTEILEFHGSLQAEELLDWLAMVEEILDFKWVPEDKRVPLVATRLRDRA 104



 Score = 61.6 bits (148), Expect(3) = 2e-24
 Identities = 27/52 (51%), Positives = 38/52 (73%)
 Frame = -1

Query: 476 AW*Q*TKVTRARTSKTKIIFWEKFKKHTREVFLPYNYERKLYQRIQLMRQGL 321
           AW Q +K+TR R  K KI   EK +KH + +FLPYN++R +YQR+Q +RQG+
Sbjct: 106 AWWQQSKLTRTRLGKDKIATSEKMRKHMQSIFLPYNFQRLMYQRLQNLRQGV 157



 Score = 32.3 bits (72), Expect(3) = 2e-24
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -3

Query: 318 SVDDYTIEFY*LLARTEIVESNPNWFSSILGG 223
           SVDDYT+E Y L+AR +I E+     +S  GG
Sbjct: 159 SVDDYTVELYQLIARNDIQEAADQLVASWGGG 190


>ref|XP_002514475.1| conserved hypothetical protein [Ricinus communis]
           gi|223546374|gb|EEF47875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 67.8 bits (164), Expect(3) = 3e-18
 Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
 Frame = -1

Query: 497 ATAWQGKA--W*Q*TKVTRARTSKTKIIFWEKFKKHTREVFLPYNYERKLYQRIQLMRQG 324
           AT  +G+A  W Q +K+TRAR  K KI   EK KKH R  FLPYN++R +YQR+Q +RQG
Sbjct: 94  ATRLRGRATAWWQQSKLTRARLEKDKIATLEKMKKHMRSAFLPYNFQRLMYQRLQNLRQG 153

Query: 323 LDLL 312
           + L+
Sbjct: 154 MRLM 157



 Score = 42.4 bits (98), Expect(3) = 3e-18
 Identities = 23/39 (58%), Positives = 25/39 (64%)
 Frame = -2

Query: 595 LQTTEFLD*LHTVEELLDFKEVPNPHHVQLITMRLRGRA 479
           LQ  EFLD L  VEE+LDFK V     V L+  RLRGRA
Sbjct: 63  LQAEEFLDWLAMVEEILDFKGVLEDKRVPLVATRLRGRA 101



 Score = 28.5 bits (62), Expect(3) = 3e-18
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 315 VDDYTIEFY*LLARTEI 265
           +DDYT EFY L+AR EI
Sbjct: 157 MDDYTTEFYQLIARNEI 173


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 79.3 bits (194), Expect(2) = 1e-16
 Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
 Frame = -2

Query: 649 NQRWESRSTIEILKFHGSLQTTEFLD*LHTVEELLDFKEVPNPHHVQLITMRLRGRAKHG 470
           ++RWE+   ++I +FH  LQ  E+LD ++TV+E+L+FK+VP    V L+  RLRGRA   
Sbjct: 80  SRRWETGLKVDIPEFHVGLQADEYLDWINTVDEVLEFKQVPEDRRVALVATRLRGRA--- 136

Query: 469 SSXXXXXXXXXXXLKSFFGRSLRSIRGKSSSHTTMNVNCINAF--------------NLC 332
                         K+   R+L+  +GK +    M  N  +AF              NL 
Sbjct: 137 ------GAWWQQVKKT---RTLQG-KGKITCWDKMKKNMRSAFLPYNYTRTLYQRLQNLR 186

Query: 331 VRAXXXXXXXXXXXLVARSNGDC*IQSQLVFKYIGGLWL*LQGVLNMLDQLTVSKAHQRA 152
                          +   +     +   V +YIG L +  Q VLNM D L+VS AHQRA
Sbjct: 187 QGNRSVDDYTTEFYQLVSRDAIAEDEESRVVRYIGRLRIQFQDVLNMFDVLSVSDAHQRA 246

Query: 151 LQAEEKLA*CTYGGFKLDG 95
           +Q E++L     GG    G
Sbjct: 247 VQLEKQLVRRNTGGLNFGG 265



 Score = 33.9 bits (76), Expect(2) = 1e-16
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -3

Query: 861 MPQRRRVN-----DAQMEDVLWRDEIEQLRQQVDRLTHXXXXXXXXXXQYEVDSEDEDFD 697
           M  +RR N     +  +++V  RDEI +L+QQV+ LT                  +E+ +
Sbjct: 1   MAPKRRANLPNLREQPLDEVYERDEIARLQQQVETLTQQLAASMAQHQDPNPQDVEEESE 60

Query: 696 HGENPFA 676
             ENPFA
Sbjct: 61  GDENPFA 67


>ref|XP_002528720.1| conserved hypothetical protein [Ricinus communis]
           gi|223531814|gb|EEF33632.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 57.0 bits (136), Expect(2) = 6e-11
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = -2

Query: 649 NQRWESRSTIEILKFHGSLQTTEFLD*LHTVEELLDFKEVPNPHHVQLITMRLRGRA 479
           N+  ES    EI +FHGSLQ  EFLD L TVEE+LDFK V     V L+  RL+GRA
Sbjct: 39  NRCRESGMRTEIPEFHGSLQAEEFLDWLATVEEILDFKGVQEDKCVPLVATRLKGRA 95



 Score = 37.0 bits (84), Expect(2) = 6e-11
 Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -1

Query: 497 ATAWQGKA--W*Q*TKVTRARTSKTKIIFWEKFKKH 396
           AT  +G+A  W Q +K+TR R  K KI  WEK KKH
Sbjct: 88  ATRLKGRAIAWWQQSKLTRTRLGKDKIATWEKMKKH 123


>ref|XP_002525524.1| conserved hypothetical protein [Ricinus communis]
           gi|223535203|gb|EEF36882.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 132

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = -2

Query: 673 PHDQLK----QTNQRWESRSTIEILKFHGSLQTTEFLD*LHTVEELLDFKEVPNPHHVQL 506
           PH + +      N+ WES    EI +FHGSLQ  EFLD L TVEE+LDFK V     V L
Sbjct: 42  PHQRQRPNAVDNNRHWESGMRTEIPEFHGSLQAEEFLDWLPTVEEILDFKGVREDKRVPL 101

Query: 505 ITMRLRGRA 479
           I  RLRGRA
Sbjct: 102 IATRLRGRA 110


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