BLASTX nr result

ID: Panax21_contig00026997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026997
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   329   3e-88
emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]   329   3e-88
ref|XP_003546780.1| PREDICTED: translation initiation factor IF-...   306   2e-81
ref|XP_003531521.1| PREDICTED: translation initiation factor IF-...   305   4e-81
sp|P57997.1|IF2C_PHAVU RecName: Full=Translation initiation fact...   305   7e-81

>ref|XP_003634785.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor IF-2,
           chloroplastic-like [Vitis vinifera]
          Length = 1047

 Score =  329 bits (843), Expect = 3e-88
 Identities = 165/224 (73%), Positives = 193/224 (86%), Gaps = 3/224 (1%)
 Frame = -3

Query: 664 AAQTKERKPILIDKFASKKAAVDPLIVQSMLXXXXXXXXXXXGRFKDDFRKKSGPLGGSR 485
           + +T+ERKPILIDKFASK+  VDP+I Q++L           G+FKDD+RKK+   GGSR
Sbjct: 284 SGKTRERKPILIDKFASKRPVVDPMIAQAVLAPPKPGKGPVPGKFKDDYRKKNASTGGSR 343

Query: 484 RR---PKDVDIPDEEASELDVSIPGAVSARKGRKWSKASRKAARLQAAREAEPVKAEILE 314
           RR     D++IPD+E SEL+VSIPGA +ARKGRKWSKASRKAARLQAA++A PVK EILE
Sbjct: 344 RRMVAANDMEIPDDETSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILE 403

Query: 313 VDEDGMLTEELAYNLATNEGEILGFLYAKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAAP 134
           V E+GMLTE+LAYNLA +EGEILGFLY+KGIKPDGVQTLDKD+VKM+CKEY+VEVIDAA 
Sbjct: 404 VGEEGMLTEDLAYNLAISEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEYEVEVIDAAG 463

Query: 133 VRVEEMAKKKEIFDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDH 2
           V+VEEMA+KKEI DE+DLDKLE+RPPVLTIMGHVDHGKTTLLDH
Sbjct: 464 VKVEEMARKKEILDEEDLDKLENRPPVLTIMGHVDHGKTTLLDH 507


>emb|CAN76368.1| hypothetical protein VITISV_024584 [Vitis vinifera]
          Length = 1005

 Score =  329 bits (843), Expect = 3e-88
 Identities = 165/224 (73%), Positives = 193/224 (86%), Gaps = 3/224 (1%)
 Frame = -3

Query: 664 AAQTKERKPILIDKFASKKAAVDPLIVQSMLXXXXXXXXXXXGRFKDDFRKKSGPLGGSR 485
           + +T+ERKPILIDKFASK+  VDP+I Q++L           G+FKDD+RKK+   GGSR
Sbjct: 274 SGKTRERKPILIDKFASKRPVVDPMIAQAVLAPPKPGKGPVPGKFKDDYRKKNASTGGSR 333

Query: 484 RR---PKDVDIPDEEASELDVSIPGAVSARKGRKWSKASRKAARLQAAREAEPVKAEILE 314
           RR     D++IPD+E SEL+VSIPGA +ARKGRKWSKASRKAARLQAA++A PVK EILE
Sbjct: 334 RRMVAANDMEIPDDETSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILE 393

Query: 313 VDEDGMLTEELAYNLATNEGEILGFLYAKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAAP 134
           V E+GMLTE+LAYNLA +EGEILGFLY+KGIKPDGVQTLDKD+VKM+CKEY+VEVIDAA 
Sbjct: 394 VGEEGMLTEDLAYNLAISEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEYEVEVIDAAG 453

Query: 133 VRVEEMAKKKEIFDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDH 2
           V+VEEMA+KKEI DE+DLDKLE+RPPVLTIMGHVDHGKTTLLDH
Sbjct: 454 VKVEEMARKKEILDEEDLDKLENRPPVLTIMGHVDHGKTTLLDH 497


>ref|XP_003546780.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Glycine max]
          Length = 1015

 Score =  306 bits (785), Expect = 2e-81
 Identities = 159/224 (70%), Positives = 185/224 (82%), Gaps = 2/224 (0%)
 Frame = -3

Query: 667 SAAQTKERK-PILIDKFASKKAAVDPLIVQSMLXXXXXXXXXXXGRFKDDFRKKSGPLGG 491
           ++ + KE+K PILIDKFASKK  VDPLI Q++L           G+FKDDFRKK    GG
Sbjct: 284 TSVKPKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKGPPPGKFKDDFRKKGATTGG 343

Query: 490 SRRRPKDVD-IPDEEASELDVSIPGAVSARKGRKWSKASRKAARLQAAREAEPVKAEILE 314
            RRR  + D I DE+ASEL+VSIPGA +ARKGRKWSKASR+AARLQAAR+A PVK EILE
Sbjct: 344 PRRRILEDDVIHDEDASELNVSIPGAATARKGRKWSKASRRAARLQAARDAAPVKVEILE 403

Query: 313 VDEDGMLTEELAYNLATNEGEILGFLYAKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAAP 134
           V + GML EELAY LAT+EGEILG+LY+KGIKPDGVQT+DKD+VKM+CKEYDVEVIDA P
Sbjct: 404 VGDKGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDADP 463

Query: 133 VRVEEMAKKKEIFDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDH 2
            +VE + KKKEI D+DDLDKL+DRPPV+TIMGHVDHGKTTLLD+
Sbjct: 464 FKVEGLVKKKEILDKDDLDKLKDRPPVITIMGHVDHGKTTLLDY 507


>ref|XP_003531521.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Glycine max]
          Length = 1010

 Score =  305 bits (782), Expect = 4e-81
 Identities = 157/224 (70%), Positives = 185/224 (82%), Gaps = 2/224 (0%)
 Frame = -3

Query: 667 SAAQTKERK-PILIDKFASKKAAVDPLIVQSMLXXXXXXXXXXXGRFKDDFRKKSGPLGG 491
           ++ ++KE+K PILIDKFASKK  VDPLI Q++L           G+FKDDFRKK    GG
Sbjct: 279 TSVKSKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKAPPPGKFKDDFRKKGAMAGG 338

Query: 490 SRRRPKDVD-IPDEEASELDVSIPGAVSARKGRKWSKASRKAARLQAAREAEPVKAEILE 314
            RRR  + D I DE+ASEL+VSIPGA +ARKGRKWSKASR+AARLQAAR+A P+K EILE
Sbjct: 339 PRRRILEDDAIHDEDASELNVSIPGAATARKGRKWSKASRRAARLQAARDAAPIKVEILE 398

Query: 313 VDEDGMLTEELAYNLATNEGEILGFLYAKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAAP 134
           V + GML EELAY LAT+EGEILG+LY+KGIKPDGVQT+DKD+VKM+CKEYDVEVIDA P
Sbjct: 399 VGDKGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDADP 458

Query: 133 VRVEEMAKKKEIFDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDH 2
            +VE + KK+EI DEDD DKL+DRPPV+TIMGHVDHGKTTLLD+
Sbjct: 459 FKVEGLVKKREILDEDDFDKLKDRPPVITIMGHVDHGKTTLLDY 502


>sp|P57997.1|IF2C_PHAVU RecName: Full=Translation initiation factor IF-2, chloroplastic;
           AltName: Full=PvIF2cp; Flags: Precursor
           gi|12958750|gb|AAK09431.1|AF324244_1 translation
           initiation factor 2 [Phaseolus vulgaris]
          Length = 1012

 Score =  305 bits (780), Expect = 7e-81
 Identities = 159/225 (70%), Positives = 187/225 (83%), Gaps = 3/225 (1%)
 Frame = -3

Query: 667 SAAQTKERK-PILIDKFASKKAAVDPLIVQSMLXXXXXXXXXXXGRFKDDFRKKSGPLGG 491
           ++ ++KE+K PILIDKFASKK  VDPLI Q++L           G+FKDDFRKK    GG
Sbjct: 286 TSVKSKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKAPSPGKFKDDFRKKGALAGG 345

Query: 490 SRRRPKDVDIPD--EEASELDVSIPGAVSARKGRKWSKASRKAARLQAAREAEPVKAEIL 317
            RRR + +D  D  ++ASEL+VSIPGA +ARKGRKWSKASRKAARLQAAR+A PVK EIL
Sbjct: 346 GRRR-RILDDEDVIQDASELNVSIPGAATARKGRKWSKASRKAARLQAARDAAPVKVEIL 404

Query: 316 EVDEDGMLTEELAYNLATNEGEILGFLYAKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAA 137
           EV + GML EELAY LAT+EGEILG+LY+KGIKPDGVQT+DKD+VKM+CKEYDVEVIDA 
Sbjct: 405 EVGDSGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDAD 464

Query: 136 PVRVEEMAKKKEIFDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDH 2
           PV+VE + KK+EI DEDDLDKL+DRPPV+TIMGHVDHGKTTLLD+
Sbjct: 465 PVKVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDY 509


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