BLASTX nr result

ID: Panax21_contig00026996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026996
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus...   166   3e-39
ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   155   4e-36
ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   152   4e-35
ref|XP_004141476.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   152   4e-35

>ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus communis]
           gi|223534752|gb|EEF36443.1| 60S ribosomal protein L7a,
           putative [Ricinus communis]
          Length = 570

 Score =  166 bits (419), Expect = 3e-39
 Identities = 84/114 (73%), Positives = 88/114 (77%), Gaps = 2/114 (1%)
 Frame = +3

Query: 210 MGAVCCCLH-EECEDYANLNSSVYRNCICLRCFVQNFLHMYVSLFRRGEEQTNSSSIQGT 386
           MGAVCCCLH E+ EDY N NSSVYRNC+CL CFVQNFLH+Y SLFRRGE  +  SSIQG 
Sbjct: 1   MGAVCCCLHAEDFEDYINPNSSVYRNCMCLSCFVQNFLHVYASLFRRGEVLSVPSSIQGA 60

Query: 387 A-XXXXXXXXXXLPDMYRSPPRPLPYDADTRYFRLQRDGLVSRREKGSSHSQEE 545
           A           L DMYRSPPRPLPYDAD RYF LQRDGLVSRREKGSSHS EE
Sbjct: 61  ASITSSASLDNSLSDMYRSPPRPLPYDADPRYFHLQRDGLVSRREKGSSHSHEE 114


>ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|222873147|gb|EEF10278.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/113 (66%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
 Frame = +3

Query: 210 MGAVCCCLH-EECEDYANLNSSVYRNCICLRCFVQNFLHMYVSLFRRGEEQTNSSSIQGT 386
           MG+VCCCLH ++ EDY N  +S YRNC+CL CFVQNFLH+Y S+FRRG+  +  SSIQG 
Sbjct: 1   MGSVCCCLHVDDFEDYMNPENSEYRNCLCLSCFVQNFLHVYTSIFRRGQVHSVPSSIQGA 60

Query: 387 AXXXXXXXXXXLPDMYRSPPRPLPYDADTRYFRLQRDGLVSRREKGSSHSQEE 545
           A          L +MYRSPPRPLPYDAD R  RLQRDGLVSRREKGSSHS EE
Sbjct: 61  ASLTSSSLDNSLAEMYRSPPRPLPYDADPRCLRLQRDGLVSRREKGSSHSHEE 113


>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|298204451|emb|CBI16931.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  155 bits (392), Expect = 4e-36
 Identities = 78/114 (68%), Positives = 86/114 (75%), Gaps = 2/114 (1%)
 Frame = +3

Query: 210 MGAVCCCLH-EECEDYANLNSSVYRNCICLRCFVQNFLHMYVSLFRRGEEQTNSSSIQGT 386
           MG+VCCCL  E+ +DY N NSS+YRNC+CL CFVQNFL++Y SLFRRGE  +  SSIQG 
Sbjct: 1   MGSVCCCLRVEDFDDYVNPNSSIYRNCMCLSCFVQNFLNVYTSLFRRGEVNSIPSSIQGA 60

Query: 387 A-XXXXXXXXXXLPDMYRSPPRPLPYDADTRYFRLQRDGLVSRREKGSSHSQEE 545
           A           L DMYRSPPRPLPYD D R FRLQRDGLVSRREKGSSHS EE
Sbjct: 61  ASLSSTTSLDDSLSDMYRSPPRPLPYDVDPRNFRLQRDGLVSRREKGSSHSHEE 114


>ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 227

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/114 (66%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = +3

Query: 210 MGAVCCCLH-EECEDYANLNSSVYRNCICLRCFVQNFLHMYVSLFRRGEEQTNSSSIQG- 383
           MGAVCCCL  E+ EDY N NSSVYRNC CL CF+Q+FL+ Y  +FRRGE  + SSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 384 TAXXXXXXXXXXLPDMYRSPPRPLPYDADTRYFRLQRDGLVSRREKGSSHSQEE 545
           T+          L +MYRSPPRPLPYDAD RY RLQRDGL+SRREKGSSH  EE
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEE 114


>ref|XP_004141476.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 227

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/114 (66%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
 Frame = +3

Query: 210 MGAVCCCLH-EECEDYANLNSSVYRNCICLRCFVQNFLHMYVSLFRRGEEQTNSSSIQG- 383
           MGAVCCCL  E+ EDY N NSSVYRNC CL CF+Q+FL+ Y  +FRRGE  + SSSIQG 
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 384 TAXXXXXXXXXXLPDMYRSPPRPLPYDADTRYFRLQRDGLVSRREKGSSHSQEE 545
           T+          L +MYRSPPRPLPYDAD RY RLQRDGL+SRREKGSSH  EE
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEE 114


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