BLASTX nr result

ID: Panax21_contig00026987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026987
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3,...   281   1e-73
emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]   273   2e-71
ref|XP_002306998.1| predicted protein [Populus trichocarpa] gi|2...   261   9e-68
ref|XP_002510727.1| conserved hypothetical protein [Ricinus comm...   258   1e-66
gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]        258   1e-66

>ref|XP_002273332.1| PREDICTED: psbP domain-containing protein 3, chloroplastic [Vitis
           vinifera] gi|297745601|emb|CBI40766.3| unnamed protein
           product [Vitis vinifera]
          Length = 253

 Score =  281 bits (719), Expect = 1e-73
 Identities = 140/222 (63%), Positives = 169/222 (76%), Gaps = 1/222 (0%)
 Frame = +3

Query: 129 KKNRYPKAICCLN-NHQDQTSSLGNQDQSQIRRREALFQTAFATFSLPTIAPLALAETAV 305
           K  +  + + C N N +++ +S G ++Q    RRE + Q  F+T SL  I P ALA+T V
Sbjct: 31  KCGKKQRVVFCKNENKEEEKTSFGIKEQHGGGRREVVLQMVFSTISLQAIVPNALADTEV 90

Query: 306 SEDFRTYSDDVNKFKLLIPQDWEVGAGEGNGIKSVTAFYPXXXXXXXXXXXXXXGLGPDF 485
            EDF+ YSD+VNKFK+ IPQDW+VG+GE +G KSVTAFYP              GLG DF
Sbjct: 91  PEDFKVYSDEVNKFKIQIPQDWQVGSGEPSGFKSVTAFYPEEASGSNVSVVIT-GLGADF 149

Query: 486 TRLESFGKVDAFAENLVSGLDRSWQRPPGVAAKLIDSKAANGLYYIEYSLQKPGESQRHL 665
           TRLESFGKVDAFAENLV+GLDRSWQRPPG+AAKLID +AANG YYIEY LQ PGES+RHL
Sbjct: 150 TRLESFGKVDAFAENLVNGLDRSWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHL 209

Query: 666 FSVLGVANNGWYNRLYTLTGQYVEEEAEKYGSKIEKAVSSFR 791
           FS +G+ANNGWYNRLYT+TGQY+EEE+EK+ SKIEK V+SFR
Sbjct: 210 FSAVGMANNGWYNRLYTVTGQYLEEESEKFSSKIEKVVASFR 251


>emb|CAN64877.1| hypothetical protein VITISV_030793 [Vitis vinifera]
          Length = 247

 Score =  273 bits (699), Expect = 2e-71
 Identities = 136/216 (62%), Positives = 164/216 (75%), Gaps = 1/216 (0%)
 Frame = +3

Query: 129 KKNRYPKAICCLN-NHQDQTSSLGNQDQSQIRRREALFQTAFATFSLPTIAPLALAETAV 305
           K  +  + + C N N +++ +S G ++Q    RRE + Q  F+T SL  I P ALA+T V
Sbjct: 31  KCGKKQRVVFCKNENKEEEKTSFGIKEQHGGGRREVVLQIVFSTISLQAIVPNALADTEV 90

Query: 306 SEDFRTYSDDVNKFKLLIPQDWEVGAGEGNGIKSVTAFYPXXXXXXXXXXXXXXGLGPDF 485
            EDF+ YSD+VNKFK+ IPQDW+VG+GE +G KSVTAFYP              GLG DF
Sbjct: 91  PEDFKVYSDEVNKFKIQIPQDWQVGSGEPSGFKSVTAFYPEEASGSNVSVVIT-GLGADF 149

Query: 486 TRLESFGKVDAFAENLVSGLDRSWQRPPGVAAKLIDSKAANGLYYIEYSLQKPGESQRHL 665
           TRLESFGKVDAFAENLV+GLDRSWQRPPG+AAKLID +AANG YYIEY LQ PGES+RHL
Sbjct: 150 TRLESFGKVDAFAENLVNGLDRSWQRPPGIAAKLIDCRAANGFYYIEYWLQNPGESRRHL 209

Query: 666 FSVLGVANNGWYNRLYTLTGQYVEEEAEKYGSKIEK 773
           FS +G+ANNGWYNRLYT+TGQY+EEE+EK+ SKIEK
Sbjct: 210 FSAVGMANNGWYNRLYTVTGQYLEEESEKFSSKIEK 245


>ref|XP_002306998.1| predicted protein [Populus trichocarpa] gi|222856447|gb|EEE93994.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  261 bits (668), Expect = 9e-68
 Identities = 129/185 (69%), Positives = 145/185 (78%)
 Frame = +3

Query: 219 RRREALFQTAFATFSLPTIAPLALAETAVSEDFRTYSDDVNKFKLLIPQDWEVGAGEGNG 398
           +RREALF   F  F+ P IA  ALA T V+ED R Y+DD NKFK+ IPQ W+VGAGE +G
Sbjct: 3   KRREALFNMVFTAFTFPAIASTALAATGVAEDSRVYTDDANKFKISIPQGWQVGAGEPSG 62

Query: 399 IKSVTAFYPXXXXXXXXXXXXXXGLGPDFTRLESFGKVDAFAENLVSGLDRSWQRPPGVA 578
            KSVTAFYP              GLGPDFTRLESFGKVDAFAE LV GLDRSWQRPPGVA
Sbjct: 63  YKSVTAFYPEEASNSSVSVVIT-GLGPDFTRLESFGKVDAFAETLVGGLDRSWQRPPGVA 121

Query: 579 AKLIDSKAANGLYYIEYSLQKPGESQRHLFSVLGVANNGWYNRLYTLTGQYVEEEAEKYG 758
           AKLIDSKAANGLYYIEY+LQ PGES+RHL S LGV  NGWYNRLYT+TGQ+V+EE+EK+G
Sbjct: 122 AKLIDSKAANGLYYIEYTLQNPGESRRHLLSALGVTFNGWYNRLYTVTGQFVDEESEKFG 181

Query: 759 SKIEK 773
           ++I K
Sbjct: 182 TEIRK 186


>ref|XP_002510727.1| conserved hypothetical protein [Ricinus communis]
           gi|223551428|gb|EEF52914.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 264

 Score =  258 bits (658), Expect = 1e-66
 Identities = 139/246 (56%), Positives = 168/246 (68%), Gaps = 6/246 (2%)
 Frame = +3

Query: 72  LLRPHVSDLFTALTHP-KDLKKNRYPKAICCLNNHQDQTSS----LGNQDQSQIRRREAL 236
           LL+P+++ L  + +      +K   P   CC N+  D+          + Q    RREAL
Sbjct: 24  LLKPNLNFLSASPSFRFNSCRKQHLP---CCTNSFPDEDQHQPLFCRFRLQEPYGRREAL 80

Query: 237 FQTAFAT-FSLPTIAPLALAETAVSEDFRTYSDDVNKFKLLIPQDWEVGAGEGNGIKSVT 413
           F  AF T F+ P +   A AE    +DFR Y+DD NKF++ IPQDW VGAGE NG KSVT
Sbjct: 81  FSVAFTTGFTFPGLISNAFAEI---DDFRLYTDDANKFQISIPQDWRVGAGEPNGFKSVT 137

Query: 414 AFYPXXXXXXXXXXXXXXGLGPDFTRLESFGKVDAFAENLVSGLDRSWQRPPGVAAKLID 593
           AFYP              GLGPDFTR+ESFGKV+AFAE LVSGLDRSWQRPPGVAAKLID
Sbjct: 138 AFYPEEASGSSVSVVIT-GLGPDFTRMESFGKVEAFAETLVSGLDRSWQRPPGVAAKLID 196

Query: 594 SKAANGLYYIEYSLQKPGESQRHLFSVLGVANNGWYNRLYTLTGQYVEEEAEKYGSKIEK 773
            KA  G+YYIEY+LQ PGE ++HLFS LG+A NGWYNRLYT+TGQ+VEEE+E YGSK++K
Sbjct: 197 CKATKGIYYIEYTLQNPGEGRKHLFSALGMAFNGWYNRLYTVTGQFVEEESENYGSKVQK 256

Query: 774 AVSSFR 791
            VSSF+
Sbjct: 257 VVSSFK 262


>gb|ACD56619.1| unknown predicted protein [Gossypioides kirkii]
          Length = 274

 Score =  258 bits (658), Expect = 1e-66
 Identities = 131/225 (58%), Positives = 158/225 (70%), Gaps = 3/225 (1%)
 Frame = +3

Query: 108 LTHPKDLKKNRYPKAICCLNNHQDQTSSLGNQDQSQIRRREALFQTAFATFSLPTI---A 278
           L  P +    R  +    L N ++     G+   +  RRR+ + Q     FS P +    
Sbjct: 23  LHFPLNSNTKRVQRLQMQLQNQEEMKEDDGHATST--RRRQFILQAPLIAFSFPQLIMST 80

Query: 279 PLALAETAVSEDFRTYSDDVNKFKLLIPQDWEVGAGEGNGIKSVTAFYPXXXXXXXXXXX 458
            +A+AE  V +DFR Y+D+ NKFK+ IPQDW+VGAGE N  KS+TAFYP           
Sbjct: 81  AIAVAEIDVPQDFRVYTDEQNKFKIFIPQDWQVGAGEPNNFKSITAFYPEEEANSNVSVA 140

Query: 459 XXXGLGPDFTRLESFGKVDAFAENLVSGLDRSWQRPPGVAAKLIDSKAANGLYYIEYSLQ 638
              GLGPDFTR+ESFGKVDAFA+ LVSGLDRSWQRPPGVAAKLID KAANG YYIEY+LQ
Sbjct: 141 IT-GLGPDFTRMESFGKVDAFADTLVSGLDRSWQRPPGVAAKLIDCKAANGFYYIEYTLQ 199

Query: 639 KPGESQRHLFSVLGVANNGWYNRLYTLTGQYVEEEAEKYGSKIEK 773
            PGES+RHLFS +G+A+NGWYNRLYT+TGQ+VEEEAEKYGS+IEK
Sbjct: 200 NPGESRRHLFSAIGMASNGWYNRLYTVTGQFVEEEAEKYGSRIEK 244


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