BLASTX nr result

ID: Panax21_contig00026986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026986
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31155.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002265744.1| PREDICTED: RING finger and transmembrane dom...    64   2e-08
ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002531811.1| protein binding protein, putative [Ricinus c...    60   2e-07
ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>emb|CBI31155.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 246 NAEAPDGAGVNHNRDSSYQRYDIQQAARWMEQVLPFSLL 362
           + EA DGAG N  RDSSYQRYDIQQAARW+EQVLPF+LL
Sbjct: 108 DGEAADGAGAN-GRDSSYQRYDIQQAARWIEQVLPFTLL 145


>ref|XP_002265744.1| PREDICTED: RING finger and transmembrane domain-containing protein
           2-like [Vitis vinifera]
          Length = 462

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 246 NAEAPDGAGVNHNRDSSYQRYDIQQAARWMEQVLPFSLL 362
           + EA DGAG N  RDSSYQRYDIQQAARW+EQVLPF+LL
Sbjct: 152 DGEAADGAGAN-GRDSSYQRYDIQQAARWIEQVLPFTLL 189


>ref|XP_002326427.1| predicted protein [Populus trichocarpa] gi|222833620|gb|EEE72097.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = +3

Query: 246 NAEAPDGAGVNHNRDSSYQRYDIQQAARWMEQVLPFSLL 362
           + EA DGAG N  RDS+YQRYDIQQAARW+EQVLPFSLL
Sbjct: 133 DGEAADGAGGN-GRDSTYQRYDIQQAARWIEQVLPFSLL 170


>ref|XP_002531811.1| protein binding protein, putative [Ricinus communis]
           gi|223528545|gb|EEF30568.1| protein binding protein,
           putative [Ricinus communis]
          Length = 475

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = +3

Query: 255 APDGAGVNHNRDSSYQRYDIQQAARWMEQVLPFSLL 362
           A DG+G N  RDSSYQRYDIQQAARW+EQVLPFSLL
Sbjct: 168 AADGSGGN-GRDSSYQRYDIQQAARWIEQVLPFSLL 202


>ref|XP_002323102.1| predicted protein [Populus trichocarpa] gi|222867732|gb|EEF04863.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +3

Query: 240 SRNAEAPDGAGVNHNRDSSYQRYDIQQAARWMEQVLPFSLL 362
           S + EA D AG N  RDS+YQRYDIQQ ARW+EQVLPFSLL
Sbjct: 132 SGDGEAADEAGGN-GRDSTYQRYDIQQVARWIEQVLPFSLL 171


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