BLASTX nr result

ID: Panax21_contig00026950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026950
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631936.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   176   7e-42
ref|XP_004157046.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   169   1e-39
ref|XP_004151818.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   169   1e-39
ref|XP_002519280.1| ubiquitin-protein ligase, putative [Ricinus ...   167   3e-39
ref|XP_003546300.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-...   166   1e-38

>ref|XP_003631936.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like isoform 1 [Vitis
           vinifera] gi|296083205|emb|CBI22841.3| unnamed protein
           product [Vitis vinifera]
          Length = 1034

 Score =  176 bits (447), Expect = 7e-42
 Identities = 86/131 (65%), Positives = 103/131 (78%)
 Frame = +3

Query: 6   EDEMIMDEEFKEKVLNKDLERQISNAIDPRFFLQ*TNILFGEFSQVNGSYKERLNNKVAA 185
           EDEM + +E  EKV+++DLE+QISNAIDPRF LQ TN LFG  S +N   +E  +++  A
Sbjct: 380 EDEMAVGDEIMEKVVSRDLEQQISNAIDPRFLLQLTNALFGGISLINHLCEEGPDDREVA 439

Query: 186 AVSAVCAFLHVTFNILPLERIMSVLAYRTELILVLWNFMKQCHENQNWSSFSEQSAYLPE 365
           A+ A CAFLHVTFNILPLERIM+VLAYRTEL+ +LW F+K+CHENQ WSS SEQ AYL  
Sbjct: 440 AIGAACAFLHVTFNILPLERIMTVLAYRTELVPLLWKFIKRCHENQKWSSLSEQLAYLSG 499

Query: 366 DAPGWLLPLAV 398
           D PGW LPLAV
Sbjct: 500 DMPGWQLPLAV 510


>ref|XP_004157046.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Cucumis sativus]
          Length = 683

 Score =  169 bits (428), Expect = 1e-39
 Identities = 84/132 (63%), Positives = 104/132 (78%)
 Frame = +3

Query: 3   DEDEMIMDEEFKEKVLNKDLERQISNAIDPRFFLQ*TNILFGEFSQVNGSYKERLNNKVA 182
           D+D ++ D+E  E  LNKD+E+QI +AIDPRF LQ  N LFG+ S+V+G Y +  ++K  
Sbjct: 380 DDDVVVSDQEI-ELALNKDVEKQICDAIDPRFLLQLANALFGQISRVSGPY-DGPDDKEV 437

Query: 183 AAVSAVCAFLHVTFNILPLERIMSVLAYRTELILVLWNFMKQCHENQNWSSFSEQSAYLP 362
            AV   CAFLHVTFN LPLE+IM+VLAYRTEL+ VLW+F+K+CHENQ WSSFSE+ AYL 
Sbjct: 438 KAVGTACAFLHVTFNTLPLEQIMTVLAYRTELVPVLWSFIKKCHENQKWSSFSEKLAYLS 497

Query: 363 EDAPGWLLPLAV 398
            DAPGWLLPLAV
Sbjct: 498 GDAPGWLLPLAV 509


>ref|XP_004151818.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like, partial [Cucumis
           sativus]
          Length = 294

 Score =  169 bits (428), Expect = 1e-39
 Identities = 84/132 (63%), Positives = 104/132 (78%)
 Frame = +3

Query: 3   DEDEMIMDEEFKEKVLNKDLERQISNAIDPRFFLQ*TNILFGEFSQVNGSYKERLNNKVA 182
           D+D ++ D+E  E  LNKD+E+QI +AIDPRF LQ  N LFG+ S+V+G Y +  ++K  
Sbjct: 33  DDDVVVSDQEI-ELALNKDVEKQICDAIDPRFLLQLANALFGQISRVSGPY-DGPDDKEV 90

Query: 183 AAVSAVCAFLHVTFNILPLERIMSVLAYRTELILVLWNFMKQCHENQNWSSFSEQSAYLP 362
            AV   CAFLHVTFN LPLE+IM+VLAYRTEL+ VLW+F+K+CHENQ WSSFSE+ AYL 
Sbjct: 91  KAVGTACAFLHVTFNTLPLEQIMTVLAYRTELVPVLWSFIKKCHENQKWSSFSEKLAYLS 150

Query: 363 EDAPGWLLPLAV 398
            DAPGWLLPLAV
Sbjct: 151 GDAPGWLLPLAV 162


>ref|XP_002519280.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223541595|gb|EEF43144.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 1067

 Score =  167 bits (424), Expect = 3e-39
 Identities = 86/132 (65%), Positives = 101/132 (76%)
 Frame = +3

Query: 3   DEDEMIMDEEFKEKVLNKDLERQISNAIDPRFFLQ*TNILFGEFSQVNGSYKERLNNKVA 182
           DED+ I D+   E V+N+DLE+QI+NAID RF LQ TN+LFG  S ++GS +  L  K  
Sbjct: 380 DEDDGIPDD--MEIVMNRDLEQQITNAIDSRFLLQLTNVLFGGLSVLSGS-EYGLEEKEI 436

Query: 183 AAVSAVCAFLHVTFNILPLERIMSVLAYRTELILVLWNFMKQCHENQNWSSFSEQSAYLP 362
            AV A CAFLHVTFN LPLERIM+VLAYRT+L+ VLWNFMKQCHE Q WSS  EQ ++LP
Sbjct: 437 MAVGAACAFLHVTFNTLPLERIMTVLAYRTDLVRVLWNFMKQCHEKQKWSSLPEQLSHLP 496

Query: 363 EDAPGWLLPLAV 398
            DAPGWLLPL V
Sbjct: 497 ADAPGWLLPLVV 508


>ref|XP_003546300.1| PREDICTED: E3 ubiquitin-protein ligase UPL6-like [Glycine max]
          Length = 1031

 Score =  166 bits (419), Expect = 1e-38
 Identities = 83/131 (63%), Positives = 100/131 (76%)
 Frame = +3

Query: 6   EDEMIMDEEFKEKVLNKDLERQISNAIDPRFFLQ*TNILFGEFSQVNGSYKERLNNKVAA 185
           EDEM  ++E  E  L++ L +QI NAID RF LQ TNILFG+FS  N S  E  ++K  A
Sbjct: 379 EDEMTGEDEVMEVALDRKLNQQICNAIDTRFLLQLTNILFGDFSSANSSDHEP-DDKEVA 437

Query: 186 AVSAVCAFLHVTFNILPLERIMSVLAYRTELILVLWNFMKQCHENQNWSSFSEQSAYLPE 365
           AV AVC FL+V FN LPLE+IM+VLAYRTEL+ +LWNFMK+CHEN+ WSS SE+ +YL  
Sbjct: 438 AVGAVCGFLYVIFNTLPLEKIMTVLAYRTELVPILWNFMKRCHENEKWSSLSERLSYLSG 497

Query: 366 DAPGWLLPLAV 398
           DAPGWLLPLAV
Sbjct: 498 DAPGWLLPLAV 508


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