BLASTX nr result

ID: Panax21_contig00026947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026947
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis ...   246   8e-63
ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|8947...   241   3e-61
ref|XP_002308802.1| GRAS family transcription factor [Populus tr...   227   4e-57
ref|XP_002322514.1| GRAS family transcription factor [Populus tr...   226   7e-57
ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [G...   222   1e-55

>ref|XP_002272401.1| PREDICTED: scarecrow-like protein 13 [Vitis vinifera]
          Length = 545

 Score =  246 bits (627), Expect = 8e-63
 Identities = 138/230 (60%), Positives = 169/230 (73%), Gaps = 6/230 (2%)
 Frame = +3

Query: 351  MQISQESQSSGTIHK-YRQSMQQIEPYSVSRFQISNNNVSSENGSQGTPVSFHC-NEQFF 524
            MQ S+E QSSG IH+ Y Q +Q+++PY +S  QI +NN    NG Q T +SF   NEQ+F
Sbjct: 1    MQTSEEHQSSGGIHRLYHQPVQELQPYCLSEIQILDNNECPSNGIQQTHLSFGTYNEQYF 60

Query: 525  TLDSSSAEYVGYD----SPSAVSISSNRSPFSPQCSQSYMSDQHQSSDNTYGSPASGSSM 692
            TL+S+     GY+    SPSA SISSNRSPFSPQ SQSY+SD H S DN  GSP SGSS 
Sbjct: 61   TLESAPVT-AGYNVCDSSPSAGSISSNRSPFSPQGSQSYLSDPHHSPDNASGSPISGSSG 119

Query: 693  VDDGNELKNILRELESKLLGPESETYDVCSYSFTSVPAEVTSLTKYDQLLQMIPSLDVKQ 872
            VDDGNEL++ LRELE  LLGPES+T D C+ SF S   +  S+ ++   ++MIP LD+KQ
Sbjct: 120  VDDGNELRHKLRELELSLLGPESDTTDSCNCSFRSGAHQAASIARWK--VEMIPRLDLKQ 177

Query: 873  VLLACAEAVSDGDISSVASLMNVLEHMVSVTGEPMQRLGAYMLEGIRARL 1022
            VL+ACAEAVS+ D+S  A LM VLE MVSV+GEP+QRLGAYMLEG+RARL
Sbjct: 178  VLVACAEAVSENDMSRTADLMGVLEQMVSVSGEPIQRLGAYMLEGLRARL 227


>ref|NP_001234305.1| GRAS1 protein [Solanum lycopersicum] gi|89474462|gb|ABD72958.1| GRAS1
            [Solanum lycopersicum]
          Length = 542

 Score =  241 bits (614), Expect = 3e-61
 Identities = 132/229 (57%), Positives = 171/229 (74%), Gaps = 3/229 (1%)
 Frame = +3

Query: 351  MQISQESQSSGTIHK-YRQSMQQIEPYSVSRFQISNNNVSSENGSQGTPVSFHC-NEQFF 524
            MQ SQ +Q SG++H  Y Q MQQ+E Y      + N+    +N S G   S    +EQFF
Sbjct: 1    MQTSQRTQMSGSVHGLYNQQMQQVEQYYAPYDVLKNS--CKDNRSSGMQFSLQAQDEQFF 58

Query: 525  TLDSSSA-EYVGYDSPSAVSISSNRSPFSPQCSQSYMSDQHQSSDNTYGSPASGSSMVDD 701
            TLDSS A +YV  DSP A+S+SSNRSPFSPQCS+SYMSD H SSDNT GSP SG S +DD
Sbjct: 59   TLDSSPATDYVVNDSPPALSVSSNRSPFSPQCSRSYMSDLHHSSDNTCGSPLSGCSGIDD 118

Query: 702  GNELKNILRELESKLLGPESETYDVCSYSFTSVPAEVTSLTKYDQLLQMIPSLDVKQVLL 881
            G +L+++LRELE+KLLGPES+T D CS S   + ++ +S+T+++++L M P L++K++L 
Sbjct: 119  G-DLRHVLRELENKLLGPESDTDDSCSCSLNDMVSKPSSVTRWNRVLDMAPGLNLKELLD 177

Query: 882  ACAEAVSDGDISSVASLMNVLEHMVSVTGEPMQRLGAYMLEGIRARLLS 1028
            ACAEAVSD DIS+  +LM+ LE  VSV+GEPM+RLGAY+LEGIRARLLS
Sbjct: 178  ACAEAVSDADISTAEALMSALEQRVSVSGEPMERLGAYVLEGIRARLLS 226


>ref|XP_002308802.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222854778|gb|EEE92325.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 546

 Score =  227 bits (578), Expect = 4e-57
 Identities = 131/229 (57%), Positives = 163/229 (71%), Gaps = 5/229 (2%)
 Frame = +3

Query: 351  MQISQESQSSGTIHKYRQSMQQIEPYSVSRFQISNNNVSSENGSQGTPVSFH-CNEQFFT 527
            MQ SQ+ +S+G    Y Q +Q+I+PY +S  QI +  + S+ GSQGT VSF  C  QFFT
Sbjct: 1    MQTSQKHRSAGIHGFYHQPVQEIDPYGLSHIQILDKTLYSDAGSQGTSVSFETCLGQFFT 60

Query: 528  LDSSSAE--YVGYDSPSAVSISSNRSPFSPQCSQSYMSDQHQSSDNTYGSPASGSSMVDD 701
            L+SSSA   +V YDSP+A SISSNRSPFS Q S S +SD   S +N YGSP SGSS  DD
Sbjct: 61   LESSSATAGFVVYDSPAA-SISSNRSPFSSQGSHSCISDPRHSPENMYGSPLSGSSSADD 119

Query: 702  GNELKNILRELESKLLGPESETYDVCSYSFTS--VPAEVTSLTKYDQLLQMIPSLDVKQV 875
            GN L+  LRELE  LLGPES+  D  S+ F S    AE  +   ++Q+++MIP LD+K V
Sbjct: 120  GNILRQKLRELEISLLGPESDITDSGSFCFVSGGYQAEPYASWDWNQMMEMIPRLDLKHV 179

Query: 876  LLACAEAVSDGDISSVASLMNVLEHMVSVTGEPMQRLGAYMLEGIRARL 1022
            LLACA+AVS+ DI   A LM+VL+ MVSV+GEP+QRLGAYMLEG+RARL
Sbjct: 180  LLACADAVSNADIQRSAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARL 228


>ref|XP_002322514.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222867144|gb|EEF04275.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 546

 Score =  226 bits (576), Expect = 7e-57
 Identities = 125/229 (54%), Positives = 165/229 (72%), Gaps = 5/229 (2%)
 Frame = +3

Query: 351  MQISQESQSSGTIHKYRQSMQQIEPYSVSRFQISNNNVSSENGSQGTPVSFHCNE-QFFT 527
            MQ SQ+ +S+G    Y Q +Q+I+PY +S  QI ++N+ S+ GSQG  +SF  ++ +FFT
Sbjct: 1    MQTSQKHRSAGIHRFYHQPVQEIDPYGLSHIQILDSNMYSDGGSQGAAISFQTDQGEFFT 60

Query: 528  LDSSSAE--YVGYDSPSAVSISSNRSPFSPQCSQSYMSDQHQSSDNTYGSPASGSSMVDD 701
            L+SSSA   +V YDSP+A S+SSNRSPFSPQ S S +SD H S D  YGSP SGSS  D+
Sbjct: 61   LESSSATAGFVNYDSPAA-SVSSNRSPFSPQGSHSCISDPHHSPDTVYGSPLSGSSSADE 119

Query: 702  GNELKNILRELESKLLGPESETYDVCSYSFTS--VPAEVTSLTKYDQLLQMIPSLDVKQV 875
               L+  LRELE  LLGPES+  D  S+ F S    AE ++   ++Q++++IP LD+K V
Sbjct: 120  DIILRQKLRELEISLLGPESDITDSGSFCFVSGGYQAESSASWDWNQMMEVIPRLDLKHV 179

Query: 876  LLACAEAVSDGDISSVASLMNVLEHMVSVTGEPMQRLGAYMLEGIRARL 1022
            LLACA+AVS+ DI   A LM+VL+ MVSV+GEP+QRLGAYMLEG+RARL
Sbjct: 180  LLACADAVSNADIQRAAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARL 228


>ref|XP_003546192.1| PREDICTED: scarecrow-like protein 13-like [Glycine max]
          Length = 552

 Score =  222 bits (565), Expect = 1e-55
 Identities = 124/234 (52%), Positives = 158/234 (67%), Gaps = 8/234 (3%)
 Frame = +3

Query: 351  MQISQESQSSGTIHKYRQSMQQIEPYSVSRFQISNN--NVSSENGSQGTPVSFHCN-EQF 521
            MQ SQ+  +S  IH Y Q  Q I+PY+  +   SN+   +   + SQGT +SF  + +Q+
Sbjct: 1    MQTSQKHPTSAGIHLYHQPAQDIDPYTHYQILQSNSCHEIHDNSSSQGTTISFETSKDQY 60

Query: 522  FTLDSSSA--EYVGYDSPSAVSISSNRSPFSPQCSQSYMSDQHQSSDNTYGSPASGSSMV 695
            FTL+SS    + +G DSPS  S+SSNRSPFSPQ S SY SDQHQSSDNTYGSP S  S  
Sbjct: 61   FTLESSPVINDLIGCDSPSYASVSSNRSPFSPQASHSYHSDQHQSSDNTYGSPTSSHSTA 120

Query: 696  DDGNELKNILRELESKLLGPESETYDVCSYSFTSVPAEVTSLTKY--DQLLQMIPSLDVK 869
            DD  ELKN LRELE  LLGP+S+  D C  S+       + + KY  DQ+++MIP L++K
Sbjct: 121  DDSYELKNKLRELEISLLGPDSDIVDSCHCSYKGGCHGASPMAKYNWDQIVEMIPKLNLK 180

Query: 870  QVLLACAEAVSDGDISSVASLM-NVLEHMVSVTGEPMQRLGAYMLEGIRARLLS 1028
            +VL+ CA+AV+D DI +    M NVL  MVSV G+P+QRLGAYMLEG+RARL S
Sbjct: 181  EVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLES 234


Top