BLASTX nr result

ID: Panax21_contig00026938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026938
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140032.1| PREDICTED: clathrin light chain 1-like [Cucu...   209   1e-51
ref|XP_002329414.1| predicted protein [Populus trichocarpa] gi|2...   206   5e-51
ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Viti...   205   2e-50
emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]   205   2e-50
ref|XP_003541915.1| PREDICTED: uncharacterized protein LOC100808...   199   9e-49

>ref|XP_004140032.1| PREDICTED: clathrin light chain 1-like [Cucumis sativus]
          Length = 340

 Score =  209 bits (531), Expect = 1e-51
 Identities = 106/157 (67%), Positives = 122/157 (77%)
 Frame = -1

Query: 960 DTEGIFSSSNEGPILPDPNQMREEGSAFREWRRQNAIYLXXXXXXXXEMRNQIINEADEY 781
           D  G+F+S  +GP+LPDP++MREEG+A REWRRQNAI L        EMRNQIINEA+EY
Sbjct: 132 DDGGLFAS--DGPVLPDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEY 189

Query: 780 KRAFTEKRKVNCETNKAHNREREKLYLANQEKFHKEADKQYWKAIGEIIPREVATMXXXX 601
           K +F EKR+VNCETNKAHNREREKLY ANQE+FHKEADK YWKAI EIIPREV  +    
Sbjct: 190 KASFYEKRRVNCETNKAHNREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRR 249

Query: 600 XXXXXXXKTSIVVIQGPKPGKPTDLTRMRQMLLKLNQ 490
                  K SI+V+QGPKPGKPTDL R+RQ+LLKL Q
Sbjct: 250 GKKDPDKKPSILVVQGPKPGKPTDLARLRQILLKLKQ 286


>ref|XP_002329414.1| predicted protein [Populus trichocarpa] gi|222870464|gb|EEF07595.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  206 bits (525), Expect = 5e-51
 Identities = 107/168 (63%), Positives = 124/168 (73%)
 Frame = -1

Query: 990 NAPEPYDLGADTEGIFSSSNEGPILPDPNQMREEGSAFREWRRQNAIYLXXXXXXXXEMR 811
           ++P   D G   +G+F+S  +GPILP+P +M+E G  FREWRRQNA++L        EMR
Sbjct: 80  SSPFETDGGGGGDGVFAS--DGPILPEPGEMQELGVKFREWRRQNALHLEEKEKREKEMR 137

Query: 810 NQIINEADEYKRAFTEKRKVNCETNKAHNREREKLYLANQEKFHKEADKQYWKAIGEIIP 631
           NQIINEA+EY RAF EKR+ NCETNKA NREREKLYLANQEKFHKEADK YWKAI EIIP
Sbjct: 138 NQIINEAEEYIRAFYEKRQQNCETNKAQNREREKLYLANQEKFHKEADKHYWKAIAEIIP 197

Query: 630 REVATMXXXXXXXXXXXKTSIVVIQGPKPGKPTDLTRMRQMLLKLNQN 487
           REV  +           K SI+VIQGPKPGKPTDL+R RQ+ LKL QN
Sbjct: 198 REVPNIKRRGGKKEDDKKPSIMVIQGPKPGKPTDLSRTRQLFLKLKQN 245


>ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Vitis vinifera]
          Length = 375

 Score =  205 bits (521), Expect = 2e-50
 Identities = 108/163 (66%), Positives = 121/163 (74%), Gaps = 1/163 (0%)
 Frame = -1

Query: 981 EPYDLGADTEGIFSSSNEGPILPDPNQMR-EEGSAFREWRRQNAIYLXXXXXXXXEMRNQ 805
           +PYD+ AD E IFSS  +GP+LP P +M+ EEG   REWRRQNAI L        EMRNQ
Sbjct: 117 KPYDISADNEDIFSS--DGPVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQ 174

Query: 804 IINEADEYKRAFTEKRKVNCETNKAHNREREKLYLANQEKFHKEADKQYWKAIGEIIPRE 625
           II EA+EYKRAF EKRKVN ETNK +NREREKLYLANQEKFHKEADKQYWKAI E+IP E
Sbjct: 175 IIEEAEEYKRAFYEKRKVNIETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHE 234

Query: 624 VATMXXXXXXXXXXXKTSIVVIQGPKPGKPTDLTRMRQMLLKL 496
           V  +           K SI VIQGPKPGKPTDL+RMR +L+KL
Sbjct: 235 VPNIEKKRGKKDPDKKPSITVIQGPKPGKPTDLSRMRHILVKL 277


>emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]
          Length = 322

 Score =  205 bits (521), Expect = 2e-50
 Identities = 108/163 (66%), Positives = 121/163 (74%), Gaps = 1/163 (0%)
 Frame = -1

Query: 981 EPYDLGADTEGIFSSSNEGPILPDPNQMR-EEGSAFREWRRQNAIYLXXXXXXXXEMRNQ 805
           +PYD+ AD E IFSS  +GP+LP P +M+ EEG   REWRRQNAI L        EMRNQ
Sbjct: 117 KPYDISADNEDIFSS--DGPVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQ 174

Query: 804 IINEADEYKRAFTEKRKVNCETNKAHNREREKLYLANQEKFHKEADKQYWKAIGEIIPRE 625
           II EA+EYKRAF EKRKVN ETNK +NREREKLYLANQEKFHKEADKQYWKAI E+IP E
Sbjct: 175 IIEEAEEYKRAFYEKRKVNIETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHE 234

Query: 624 VATMXXXXXXXXXXXKTSIVVIQGPKPGKPTDLTRMRQMLLKL 496
           V  +           K SI VIQGPKPGKPTDL+RMR +L+KL
Sbjct: 235 VPNIEKKRGKKDPDKKPSITVIQGPKPGKPTDLSRMRHILVKL 277


>ref|XP_003541915.1| PREDICTED: uncharacterized protein LOC100808804 [Glycine max]
          Length = 328

 Score =  199 bits (506), Expect = 9e-49
 Identities = 104/164 (63%), Positives = 119/164 (72%)
 Frame = -1

Query: 978 PYDLGADTEGIFSSSNEGPILPDPNQMREEGSAFREWRRQNAIYLXXXXXXXXEMRNQII 799
           P++  A  +  FSS  +GP+LPDP+QM+EEG A REWRR NAI+L        EMRNQII
Sbjct: 82  PFEPAAADDTTFSS--DGPMLPDPSQMQEEGRARREWRRLNAIHLEEKETREKEMRNQII 139

Query: 798 NEADEYKRAFTEKRKVNCETNKAHNREREKLYLANQEKFHKEADKQYWKAIGEIIPREVA 619
            EA+EYK AF EKRKVNCE NK +NREREK++LANQEKFHKEA   YWKAI EIIPREV 
Sbjct: 140 KEAEEYKEAFYEKRKVNCEKNKENNREREKIHLANQEKFHKEAHNHYWKAIAEIIPREVP 199

Query: 618 TMXXXXXXXXXXXKTSIVVIQGPKPGKPTDLTRMRQMLLKLNQN 487
            +           K S+ VIQGPKPGKPTDL RMRQM+LKL QN
Sbjct: 200 NIEKRRGKKEGENKPSVHVIQGPKPGKPTDLARMRQMILKLKQN 243


Top