BLASTX nr result

ID: Panax21_contig00026915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026915
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   687   0.0  
ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   670   0.0  
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   657   0.0  
ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arab...   651   0.0  
ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thali...   651   0.0  

>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  687 bits (1774), Expect = 0.0
 Identities = 331/415 (79%), Positives = 379/415 (91%)
 Frame = +3

Query: 234  VDVRTLYQNGDPLGRRDLGKHVVKWIGQGMKAMASDFAAAEIQGEFAEVKQRMGPGLTFV 413
            V VRTLYQNGDPLGRR+L + VV+WI QGM+ MA DFA+AE+QGEFAE++QRMGPGL+FV
Sbjct: 94   VSVRTLYQNGDPLGRRELRRCVVRWISQGMRGMALDFASAELQGEFAELRQRMGPGLSFV 153

Query: 414  IQAQPYLNAIPMPVGVEAVCLKVCTHYPTLFDHFQRELRDVLQKLQAKSVIENWCETESW 593
            IQAQPYLNAIPMP+G EA+CLK CTHYPTLFDHFQRELRDVLQ  Q KS  ++W ET+SW
Sbjct: 154  IQAQPYLNAIPMPLGHEAICLKACTHYPTLFDHFQRELRDVLQDHQRKSQFQDWRETQSW 213

Query: 594  KLLKELANSAQHKAIARKVSQPKAVQGALGLDIHKVKAIQSRIDDFTKQMSELLLIERDS 773
            +LLKELANSAQH+AI+RKVSQPK ++G LG+++ K KAIQSRID+FTK+MSELL IERDS
Sbjct: 214  QLLKELANSAQHRAISRKVSQPKPLKGVLGMELDKAKAIQSRIDEFTKRMSELLQIERDS 273

Query: 774  ELEFTQQELDAFPTPDETSDSSKPIEFLVAHGQVEQELCETICNLVAVSTFIGLGGMHLV 953
            ELEFTQ+EL+A PTPDE+SDSSKPIEFLV+HGQ +QELC+TICNL AVSTFIGLGGMHLV
Sbjct: 274  ELEFTQEELNAVPTPDESSDSSKPIEFLVSHGQAQQELCDTICNLNAVSTFIGLGGMHLV 333

Query: 954  LFRVEGHHRLPPTTLSPGDMVCVRTCDSRGGGASSCIQGFVNNLGEDGCSISVALESRHG 1133
            LF+VEG+HRLPPTTLSPGDMVCVR CDSRG GA+SC+QGFV++LG+DGCSISVALESRHG
Sbjct: 334  LFKVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKDGCSISVALESRHG 393

Query: 1134 DPTFSKLFGKSVRIDRIYGLADTLTYERNCEALMMLQKKGLRTKNPSIGIVATLFGDEDD 1313
            DPTFSKLFGKSVRIDRI+GLAD LTYERNCEALM+LQK GL+ KNPSI +VATLFGD++D
Sbjct: 394  DPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAVVATLFGDKED 453

Query: 1314 IAWLEENHVVEWAEAELDGLLDFETYDDSQLRAIALGLNKKRPMLIIQGPPGTGK 1478
            +AWLEEN +V+WAE  LD LL+   YDDSQ RAIALGLNKKRP+LIIQGPPGTGK
Sbjct: 454  VAWLEENDLVDWAEVGLDELLESGAYDDSQRRAIALGLNKKRPILIIQGPPGTGK 508


>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
            gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
            putative [Ricinus communis]
          Length = 989

 Score =  670 bits (1728), Expect = 0.0
 Identities = 331/463 (71%), Positives = 380/463 (82%), Gaps = 2/463 (0%)
 Frame = +3

Query: 96   TKKRNKRVGNSGAASKNPKXXXXXXXXXXXIKXXXXXXXXXXXXNRVDVRTLYQNGDPLG 275
            TKKR   V  S   SKN K            K             +V+V++L+QNGDPLG
Sbjct: 84   TKKRKAHVKKSTGMSKNTKKYTAANTDGG--KLAVSEEREEKVKMKVNVKSLHQNGDPLG 141

Query: 276  RRDLGKHVVKWIGQGMKAMASDFAAAEIQGEFAEVKQRMG--PGLTFVIQAQPYLNAIPM 449
            ++DLGK VVKWI QGM+AMA+DFA+AE QGEF E++QRM    GLTFVIQAQPY+NA+P+
Sbjct: 142  KKDLGKTVVKWISQGMRAMAADFASAETQGEFLELRQRMDLEAGLTFVIQAQPYINAVPI 201

Query: 450  PVGVEAVCLKVCTHYPTLFDHFQRELRDVLQKLQAKSVIENWCETESWKLLKELANSAQH 629
            P+G EA+CLK C HYPTLFDHFQRELRDVLQ LQ K ++++W  TESWKLLKELANS QH
Sbjct: 202  PLGFEALCLKACIHYPTLFDHFQRELRDVLQDLQRKGLVQDWQNTESWKLLKELANSVQH 261

Query: 630  KAIARKVSQPKAVQGALGLDIHKVKAIQSRIDDFTKQMSELLLIERDSELEFTQQELDAF 809
            +A+ARKVS+PK +QG LG+++ K KAIQSRID+FTK MSELL IERDSELEFTQ+EL+A 
Sbjct: 262  RAVARKVSKPKPLQGVLGMNLDKAKAIQSRIDEFTKTMSELLQIERDSELEFTQEELNAV 321

Query: 810  PTPDETSDSSKPIEFLVAHGQVEQELCETICNLVAVSTFIGLGGMHLVLFRVEGHHRLPP 989
            PTPDE SD SKPIEFLV+HGQ +QELC+TICNL AVST  GLGGMHLVLFRVEG+HRLPP
Sbjct: 322  PTPDENSDPSKPIEFLVSHGQAQQELCDTICNLNAVSTSTGLGGMHLVLFRVEGNHRLPP 381

Query: 990  TTLSPGDMVCVRTCDSRGGGASSCIQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKSV 1169
            T LSPGDMVCVR CDSRG GA+SC+QGFVNNLGEDGCSISVALESRHGDPTFSKLFGK V
Sbjct: 382  TNLSPGDMVCVRICDSRGAGATSCMQGFVNNLGEDGCSISVALESRHGDPTFSKLFGKGV 441

Query: 1170 RIDRIYGLADTLTYERNCEALMMLQKKGLRTKNPSIGIVATLFGDEDDIAWLEENHVVEW 1349
            RIDRI+GLAD LTYERNCEALM+LQK GL+ KNPSI IVATLFGD +D+AWLEE  + EW
Sbjct: 442  RIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAIVATLFGDSEDLAWLEEKDLAEW 501

Query: 1350 AEAELDGLLDFETYDDSQLRAIALGLNKKRPMLIIQGPPGTGK 1478
             EA++DG    E +DDSQ RA+ALGLN+KRP+LIIQGPPGTGK
Sbjct: 502  NEADMDGCFGSERFDDSQRRAMALGLNQKRPLLIIQGPPGTGK 544


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
            gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
            protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score =  657 bits (1695), Expect = 0.0
 Identities = 316/415 (76%), Positives = 369/415 (88%)
 Frame = +3

Query: 234  VDVRTLYQNGDPLGRRDLGKHVVKWIGQGMKAMASDFAAAEIQGEFAEVKQRMGPGLTFV 413
            V+V+ +YQNGDPLGRR+LGK VV+WIG  M+AMASDFAAAE+QG+F E++QRMG GLTFV
Sbjct: 98   VNVQGIYQNGDPLGRRELGKSVVRWIGLAMRAMASDFAAAEVQGDFPELQQRMGQGLTFV 157

Query: 414  IQAQPYLNAIPMPVGVEAVCLKVCTHYPTLFDHFQRELRDVLQKLQAKSVIENWCETESW 593
            IQAQPYLNA+PMP+G+EAVCLK  THYPTLFDHFQRELRDVLQ LQ +S+  +W ET+SW
Sbjct: 158  IQAQPYLNAVPMPLGLEAVCLKASTHYPTLFDHFQRELRDVLQDLQRQSLFLDWRETQSW 217

Query: 594  KLLKELANSAQHKAIARKVSQPKAVQGALGLDIHKVKAIQSRIDDFTKQMSELLLIERDS 773
            KLLK+LA+S QHKAIARK+S+PK VQGALG+D+ K KAIQ+RID+F  +MSELL IERDS
Sbjct: 218  KLLKKLAHSVQHKAIARKISEPKVVQGALGMDLKKAKAIQNRIDEFANRMSELLRIERDS 277

Query: 774  ELEFTQQELDAFPTPDETSDSSKPIEFLVAHGQVEQELCETICNLVAVSTFIGLGGMHLV 953
            ELEFTQ+EL+A PTPDE+SD+SKPIEFLV+HGQ +QELC+TICNL AVST  GLGGMHLV
Sbjct: 278  ELEFTQEELNAVPTPDESSDNSKPIEFLVSHGQAQQELCDTICNLNAVSTSTGLGGMHLV 337

Query: 954  LFRVEGHHRLPPTTLSPGDMVCVRTCDSRGGGASSCIQGFVNNLGEDGCSISVALESRHG 1133
            LFRVEG HRLPPTTLSPGDMVCVR CDSRG GA+SC+QGFVNNLG+DGCSI+VALESRHG
Sbjct: 338  LFRVEGSHRLPPTTLSPGDMVCVRVCDSRGAGATSCMQGFVNNLGDDGCSITVALESRHG 397

Query: 1134 DPTFSKLFGKSVRIDRIYGLADTLTYERNCEALMMLQKKGLRTKNPSIGIVATLFGDEDD 1313
            DPTFSKLFGK+VRIDRI GLADTLTYERNCEALM+LQK GL  KNPSI +VATLFGD++D
Sbjct: 398  DPTFSKLFGKTVRIDRIPGLADTLTYERNCEALMLLQKNGLHKKNPSIAVVATLFGDKED 457

Query: 1314 IAWLEENHVVEWAEAELDGLLDFETYDDSQLRAIALGLNKKRPMLIIQGPPGTGK 1478
            I W+E+N+++  A+  LDG++    +DDSQ  AI+  LNKKRP+LIIQGPPGTGK
Sbjct: 458  IKWMEDNNLIGLADTNLDGIVFNGDFDDSQKSAISRALNKKRPILIIQGPPGTGK 512


>ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
            lyrata] gi|297316296|gb|EFH46719.1| hypothetical protein
            ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata]
          Length = 979

 Score =  651 bits (1680), Expect = 0.0
 Identities = 310/415 (74%), Positives = 358/415 (86%)
 Frame = +3

Query: 234  VDVRTLYQNGDPLGRRDLGKHVVKWIGQGMKAMASDFAAAEIQGEFAEVKQRMGPGLTFV 413
            + +R L QNGDPLGRRDLG++VVKWI Q MKAMASDFA AE+QGEF+E++Q +G GLTFV
Sbjct: 120  LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDFANAEVQGEFSELRQNVGSGLTFV 179

Query: 414  IQAQPYLNAIPMPVGVEAVCLKVCTHYPTLFDHFQRELRDVLQKLQAKSVIENWCETESW 593
            IQAQPYLNAIPMP+G E +CLK CTHYPTLFDHFQRELRDVLQ L+ K+++ENW ETESW
Sbjct: 180  IQAQPYLNAIPMPLGSEVICLKACTHYPTLFDHFQRELRDVLQDLERKNIMENWKETESW 239

Query: 594  KLLKELANSAQHKAIARKVSQPKAVQGALGLDIHKVKAIQSRIDDFTKQMSELLLIERDS 773
            KLLKE+ANSAQH+ +ARK +Q K VQG  G+   KVKAIQ+RID+FT  MS+LL +ERD+
Sbjct: 240  KLLKEIANSAQHREVARKAAQAKPVQGGFGMSSEKVKAIQARIDEFTSHMSQLLQVERDT 299

Query: 774  ELEFTQQELDAFPTPDETSDSSKPIEFLVAHGQVEQELCETICNLVAVSTFIGLGGMHLV 953
            ELE TQ+ELD  PTPDE+SDSSKPIEFLV HG   QELC+TICNL AVST  GLGGMHLV
Sbjct: 300  ELEVTQEELDVIPTPDESSDSSKPIEFLVRHGDAPQELCDTICNLYAVSTSTGLGGMHLV 359

Query: 954  LFRVEGHHRLPPTTLSPGDMVCVRTCDSRGGGASSCIQGFVNNLGEDGCSISVALESRHG 1133
            LF+V G+HRLPPTTLSPGDMVC+R CDSRG GA++C QGFV+NLGEDGCSI VALESRHG
Sbjct: 360  LFKVGGNHRLPPTTLSPGDMVCIRVCDSRGAGATACTQGFVHNLGEDGCSIGVALESRHG 419

Query: 1134 DPTFSKLFGKSVRIDRIYGLADTLTYERNCEALMMLQKKGLRTKNPSIGIVATLFGDEDD 1313
            DPTFSKLFGKSVRIDRI+GLAD LTYERNCEALM+LQK GL+ KNPSI +VATLFGDE+D
Sbjct: 420  DPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFGDEED 479

Query: 1314 IAWLEENHVVEWAEAELDGLLDFETYDDSQLRAIALGLNKKRPMLIIQGPPGTGK 1478
            I WLE+N  V+W+EAEL      + +D SQ RAIALG+NKKRP++I+QGPPGTGK
Sbjct: 480  ITWLEQNDYVDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGK 534


>ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
            gi|332006651|gb|AED94034.1| putative DNA-binding protein
            [Arabidopsis thaliana]
          Length = 961

 Score =  651 bits (1679), Expect = 0.0
 Identities = 310/415 (74%), Positives = 359/415 (86%)
 Frame = +3

Query: 234  VDVRTLYQNGDPLGRRDLGKHVVKWIGQGMKAMASDFAAAEIQGEFAEVKQRMGPGLTFV 413
            + +R L QNGDPLGRRDLG++VVKWI Q MKAMASDFA AE+QGEF+E++Q +G GLTFV
Sbjct: 102  LSLRALNQNGDPLGRRDLGRNVVKWISQAMKAMASDFATAEVQGEFSELRQNVGSGLTFV 161

Query: 414  IQAQPYLNAIPMPVGVEAVCLKVCTHYPTLFDHFQRELRDVLQKLQAKSVIENWCETESW 593
            IQAQPYLNAIPMP+G E +CLK CTHYPTLFDHFQRELRDVLQ L+ K+++E+W E+ESW
Sbjct: 162  IQAQPYLNAIPMPLGSEVICLKACTHYPTLFDHFQRELRDVLQDLERKNIMESWKESESW 221

Query: 594  KLLKELANSAQHKAIARKVSQPKAVQGALGLDIHKVKAIQSRIDDFTKQMSELLLIERDS 773
            KLLKE+ANSAQH+ +ARK +Q K VQG LG+D  KVKAIQ RID+FT QMS+LL +ERD+
Sbjct: 222  KLLKEIANSAQHREVARKAAQAKPVQGVLGMDSEKVKAIQERIDEFTSQMSQLLQVERDT 281

Query: 774  ELEFTQQELDAFPTPDETSDSSKPIEFLVAHGQVEQELCETICNLVAVSTFIGLGGMHLV 953
            ELE TQ+ELD  PTPDE+SDSSKPIEFLV HG   QELC+TICNL AVST  GLGGMHLV
Sbjct: 282  ELEVTQEELDVVPTPDESSDSSKPIEFLVRHGDAPQELCDTICNLYAVSTSTGLGGMHLV 341

Query: 954  LFRVEGHHRLPPTTLSPGDMVCVRTCDSRGGGASSCIQGFVNNLGEDGCSISVALESRHG 1133
            LF+V G+HRLPPTTLSPGDMVC+R CDSRG GA++C QGFV+NLGEDGCSI VALESRHG
Sbjct: 342  LFKVGGNHRLPPTTLSPGDMVCIRVCDSRGAGATACTQGFVHNLGEDGCSIGVALESRHG 401

Query: 1134 DPTFSKLFGKSVRIDRIYGLADTLTYERNCEALMMLQKKGLRTKNPSIGIVATLFGDEDD 1313
            DPTFSKLFGKSVRIDRI+GLAD LTYERNCEALM+LQK GL+ KNPSI +VATLFGD +D
Sbjct: 402  DPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFGDGED 461

Query: 1314 IAWLEENHVVEWAEAELDGLLDFETYDDSQLRAIALGLNKKRPMLIIQGPPGTGK 1478
            I WLE+N  V+W+EAEL      + +D SQ RAIALG+NKKRP++I+QGPPGTGK
Sbjct: 462  ITWLEQNDYVDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGK 516


Top