BLASTX nr result

ID: Panax21_contig00026912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00026912
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 3...   238   4e-61
ref|XP_004142902.1| PREDICTED: U-box domain-containing protein 3...   236   1e-60
ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   229   2e-58
ref|XP_003539260.1| PREDICTED: U-box domain-containing protein 3...   228   3e-58
ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 3...   228   3e-58

>ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 452

 Score =  238 bits (607), Expect = 4e-61
 Identities = 110/134 (82%), Positives = 123/134 (91%)
 Frame = -1

Query: 402 EPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSVTPNTTLYQLSYSWFSQK 223
           EPMQDPVT+CTGQTYERSNI+KWFS+GHFTCPTTMQELWDDS+TPN TLYQL YSWFSQK
Sbjct: 79  EPMQDPVTICTGQTYERSNIVKWFSMGHFTCPTTMQELWDDSITPNKTLYQLIYSWFSQK 138

Query: 222 YMAIKKRSEDVQGRVLEILENLKKVKGQARVQSLKELRQVVATHDSAKKTVVDNGGVSFL 43
           Y+ +KKRSEDVQGR LE+LE LKKVKGQAR+Q+LKELRQVV+ H SAKKTV DNGG+  +
Sbjct: 139 YLVMKKRSEDVQGRALEVLETLKKVKGQARIQALKELRQVVSIHASAKKTVADNGGIGLI 198

Query: 42  SSLLGNFTTHAVGS 1
           SSLLG FT+HAVGS
Sbjct: 199 SSLLGPFTSHAVGS 212


>ref|XP_004142902.1| PREDICTED: U-box domain-containing protein 31-like [Cucumis
           sativus] gi|449494388|ref|XP_004159533.1| PREDICTED:
           U-box domain-containing protein 31-like [Cucumis
           sativus]
          Length = 455

 Score =  236 bits (602), Expect = 1e-60
 Identities = 111/134 (82%), Positives = 126/134 (94%)
 Frame = -1

Query: 402 EPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSVTPNTTLYQLSYSWFSQK 223
           EPMQDPVTLC+GQTYERSNILKWFSLGH TCPTTMQELWDDSVTPN TL+QL ++WFSQK
Sbjct: 82  EPMQDPVTLCSGQTYERSNILKWFSLGHLTCPTTMQELWDDSVTPNRTLHQLIHTWFSQK 141

Query: 222 YMAIKKRSEDVQGRVLEILENLKKVKGQARVQSLKELRQVVATHDSAKKTVVDNGGVSFL 43
           Y+A+KKRSEDVQGRVLE+L++LKKVKGQARVQSLK+LR +V TH SAKK VVDNGGV+ +
Sbjct: 142 YLALKKRSEDVQGRVLELLDSLKKVKGQARVQSLKDLRHIVITHSSAKKMVVDNGGVALI 201

Query: 42  SSLLGNFTTHAVGS 1
           SSLLG+FT+HAVGS
Sbjct: 202 SSLLGSFTSHAVGS 215


>ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550772|gb|EEF52258.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 451

 Score =  229 bits (583), Expect = 2e-58
 Identities = 108/134 (80%), Positives = 122/134 (91%)
 Frame = -1

Query: 402 EPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSVTPNTTLYQLSYSWFSQK 223
           +PMQDPVTLCTGQTYERSNILKWF  GH+TCPTTMQELWD++VTPN TL QL YSWFSQK
Sbjct: 78  DPMQDPVTLCTGQTYERSNILKWFCFGHYTCPTTMQELWDNTVTPNRTLQQLIYSWFSQK 137

Query: 222 YMAIKKRSEDVQGRVLEILENLKKVKGQARVQSLKELRQVVATHDSAKKTVVDNGGVSFL 43
           Y+A+KKRSEDVQGR +EILE LKKVKGQARVQ+LKELRQVV  H +A+KTV+DNGGV+ +
Sbjct: 138 YLAMKKRSEDVQGRAIEILETLKKVKGQARVQALKELRQVVTAHATARKTVLDNGGVATV 197

Query: 42  SSLLGNFTTHAVGS 1
           S+LLG FTTHAVGS
Sbjct: 198 SNLLGPFTTHAVGS 211


>ref|XP_003539260.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 449

 Score =  228 bits (582), Expect = 3e-58
 Identities = 108/134 (80%), Positives = 122/134 (91%)
 Frame = -1

Query: 402 EPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSVTPNTTLYQLSYSWFSQK 223
           EPMQDPVTLCTGQTYERSNILKWF+LGHFTCPTTMQELWDDSVTPNTTLY+L + WFSQK
Sbjct: 76  EPMQDPVTLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSVTPNTTLYRLIHMWFSQK 135

Query: 222 YMAIKKRSEDVQGRVLEILENLKKVKGQARVQSLKELRQVVATHDSAKKTVVDNGGVSFL 43
           Y+ +KKRSEDVQGR  E+LE LKKVK QARVQ+LKEL Q+VA+H +A+KTV+D GGVS +
Sbjct: 136 YLLMKKRSEDVQGRASELLETLKKVKSQARVQALKELHQLVASHATARKTVIDEGGVSVV 195

Query: 42  SSLLGNFTTHAVGS 1
           SSLLG FT+HAVGS
Sbjct: 196 SSLLGPFTSHAVGS 209


>ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 449

 Score =  228 bits (582), Expect = 3e-58
 Identities = 106/134 (79%), Positives = 123/134 (91%)
 Frame = -1

Query: 402 EPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSVTPNTTLYQLSYSWFSQK 223
           EPMQDP+TLCTGQTYERSNILKWF+LGHFTCPTTMQELWDDSVTPNTTLY+L ++WFSQK
Sbjct: 76  EPMQDPITLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSVTPNTTLYRLIHTWFSQK 135

Query: 222 YMAIKKRSEDVQGRVLEILENLKKVKGQARVQSLKELRQVVATHDSAKKTVVDNGGVSFL 43
           Y+ +KKRSEDVQGR  E+LE LKKVKGQARVQ+LKE+ Q+VA+H +A+K V+D GGVS +
Sbjct: 136 YLLMKKRSEDVQGRASELLETLKKVKGQARVQALKEIHQLVASHATARKAVIDEGGVSVV 195

Query: 42  SSLLGNFTTHAVGS 1
           SSLLG FT+HAVGS
Sbjct: 196 SSLLGPFTSHAVGS 209


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